Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNA5SP52-201ENST00000362448 134 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP513-201ENST00000364648 118 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.272-201ENST00000364696 102 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.308-201ENST00000365043 101 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-926P-201ENST00000384075 107 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-658P-201ENST00000384606 106 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNU1-82P-201ENST00000390851 165 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 Y_RNA.586-201ENST00000391146 98 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNA5SP113-201ENST00000410486 84 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 TOMM22P6-201ENST00000465035 409 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RPL23AP45-201ENST00000476406 468 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 SNORA31.22-201ENST00000517204 135 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 SRGNP1-201ENST00000603392 451 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AC091979.2-201ENST00000607514 214 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 AL672167.1-203ENST00000641299 2975 ntBASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUCKS1Q9H1E3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 UBE2L2-201ENST00000254302 429 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-263P-201ENST00000363811 107 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-395P-201ENST00000365662 106 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-1279P-201ENST00000383917 103 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-44P-201ENST00000384045 107 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 Z98745.1-201ENST00000402553 494 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RN7SKP267-201ENST00000410381 285 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RPL7AP73-201ENST00000413490 353 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL592148.1-201ENST00000413568 445 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 RPL30P1-201ENST00000488676 339 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 SCARNA22-201ENST00000503991 125 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AP001880.2-201ENST00000538233 448 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC025946.2-201ENST00000603398 234 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AC116447.1-201ENST00000613153 453 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUCKS1Q9H1E3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 UBE2WP1-201ENST00000362030 340 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-222P-201ENST00000362438 107 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.353-201ENST00000365440 108 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-514P-201ENST00000384208 107 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 Y_RNA.488-201ENST00000384403 102 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 RNU6-1289P-201ENST00000384431 106 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC099336.2-201ENST00000422457 254 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 RPS26P47-201ENST00000427219 348 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC099560.2-201ENST00000457554 255 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AP001025.1-201ENST00000486139 332 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC091959.1-201ENST00000495857 238 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AK3P2-201ENST00000507976 429 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 HMGB1P14-201ENST00000557424 591 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC004825.2-201ENST00000616634 455 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AC125257.1-201ENST00000560400 2930 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AP000756.2-201ENST00000624168 2567 ntBASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUCKS1Q9H1E3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUCKS1Q9H1E3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms