Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RNU6-879P-201ENST00000364328 108 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 Y_RNA.292-201ENST00000364904 97 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 RNU6-318P-201ENST00000384283 103 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 RPL23AP48-201ENST00000406913 488 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 RPS12P23-201ENST00000419579 400 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC010326.1-201ENST00000462726 602 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 MIR548AI-201ENST00000579940 88 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC093799.2-201ENST00000610062 578 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 AC099506.2-201ENST00000623074 221 ntBASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
PHACTR1Q9C0D0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC025031.4-201ENST00000621248 3271 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 Y_RNA.170-201ENST00000363746 110 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 SNORA58B-201ENST00000364259 136 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RNU6-740P-201ENST00000364734 105 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RNY1P5-201ENST00000383890 115 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RNU1-139P-201ENST00000391307 165 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RPS4XP3-201ENST00000398541 413 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RAB9AP3-201ENST00000412737 573 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 CYCSP32-201ENST00000440548 321 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 H2AFZP5-201ENST00000446960 382 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RAB9AP1-201ENST00000449393 573 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RPL7P47-201ENST00000497299 556 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 HMGB1P22-201ENST00000505315 124 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 RN7SKP66-201ENST00000516681 231 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 TRAV28-201ENST00000557548 323 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC022726.1-201ENST00000587475 207 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 AC021753.1-201ENST00000635724 168 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PHACTR1Q9C0D0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 NOL8P1-201ENST00000508336 3529 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RNA5SP455-201ENST00000365190 119 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RNU6-47P-201ENST00000383866 107 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 MIR32-201ENST00000384965 70 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 U3.30-201ENST00000391308 210 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RNU5A-5P-201ENST00000411054 116 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RN7SL727P-201ENST00000482164 296 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 RPL31P13-201ENST00000484151 370 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 AC008897.1-201ENST00000494006 347 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 SNORD116-28-201ENST00000516123 91 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 MIR3691-201ENST00000578066 90 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 AC006116.3-201ENST00000592968 361 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 AC015813.4-201ENST00000610469 179 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 MIR6798-201ENST00000612887 67 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.78□□□□□ -1.64
PHACTR1Q9C0D0 AC090740.1-201ENST00000623193 2262 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 AL133412.1-201ENST00000380194 2992 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 RNU6-858P-201ENST00000362436 107 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 RNU6-527P-201ENST00000363425 104 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 Y_RNA.569-201ENST00000384749 103 ntBASIC4.77□□□□□ -1.65
PHACTR1Q9C0D0 MIR153-2-201ENST00000385225 87 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms