Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA3Q99758 AL121652.1-201ENST00000608851 448 ntBASIC0.94□□□□□ -2.26
ABCA3Q99758 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ABCA3Q99758 RNU6-942P-201ENST00000363002 107 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 RNU6-233P-201ENST00000410845 141 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 HSPE1P21-201ENST00000438283 308 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.93□□□□□ -2.26
ABCA3Q99758 RPL39P29-201ENST00000447779 157 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.93□□□□□ -2.26
ABCA3Q99758 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.93□□□□□ -2.26
ABCA3Q99758 RNA5SP112-201ENST00000515937 99 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 RNU6-496P-201ENST00000516145 99 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 AC104997.1-201ENST00000519761 717 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 AC107953.1-201ENST00000522216 297 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.93□□□□□ -2.26
ABCA3Q99758 AC105224.1-201ENST00000587055 421 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 AC007349.4-201ENST00000608114 532 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 AC110792.4-201ENST00000609843 298 ntBASIC0.93□□□□□ -2.26
ABCA3Q99758 RNA5SP347-201ENST00000362445 119 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
ABCA3Q99758 FTH1P15-201ENST00000406984 280 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC007742.1-201ENST00000425789 329 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.92□□□□□ -2.26
ABCA3Q99758 ELOCP26-201ENST00000436067 329 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA3Q99758 AC021146.2-201ENST00000504736 556 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC098862.1-201ENST00000504991 413 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AP003973.1-201ENST00000604639 691 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 MTND4LP5-201ENST00000605152 292 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.92□□□□□ -2.26
ABCA3Q99758 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.92□□□□□ -2.26
ABCA3Q99758 NACAP2-201ENST00000318548 624 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 SNORA8-201ENST00000384574 139 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA3Q99758 SUMO2P2-201ENST00000456482 255 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 MRPS17P3-201ENST00000465453 385 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.92□□□□□ -2.26
ABCA3Q99758 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA3Q99758 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA3Q99758 HSPE1P19-201ENST00000603327 295 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AP000238.1-201ENST00000608759 426 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC243829.3-201ENST00000622177 108 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AL356585.4-201ENST00000623078 1229 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC073308.1-201ENST00000623696 305 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AL049641.1-201ENST00000441055 1948 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 AC073544.1-201ENST00000600110 1595 ntBASIC0.92□□□□□ -2.26
ABCA3Q99758 Y_RNA.518-201ENST00000384552 113 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 RPL23AP32-201ENST00000395315 459 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 MIR1290-201ENST00000408735 78 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 RPL36P19-201ENST00000430744 301 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA3Q99758 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
ABCA3Q99758 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA3Q99758 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA3Q99758 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 HMGB1P51-201ENST00000605166 638 ntBASIC0.91□□□□□ -2.26
ABCA3Q99758 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
ABCA3Q99758 Y_RNA.280-201ENST00000364765 112 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 RNU6-1083P-201ENST00000384022 107 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 RNU6-750P-201ENST00000390946 107 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA3Q99758 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA3Q99758 MRPL35P3-201ENST00000421557 364 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 RPL7P29-201ENST00000437151 728 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.9□□□□□ -2.27
ABCA3Q99758 PTENP1-201ENST00000447117 1215 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA3Q99758 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA3Q99758 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA3Q99758 SNORA48.11-201ENST00000517015 89 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.9□□□□□ -2.27
ABCA3Q99758 OR6C7P-201ENST00000547875 934 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AL391261.3-201ENST00000557194 520 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AC025588.3-201ENST00000604182 274 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 AL138478.1-201ENST00000612252 832 ntBASIC0.9□□□□□ -2.27
ABCA3Q99758 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA3Q99758 ZNF29P-201ENST00000225587 168 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 Y_RNA.390-201ENST00000383932 102 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA3Q99758 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 RPS20P10-201ENST00000451209 253 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AL049714.1-201ENST00000466686 347 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AC026271.5-201ENST00000577873 130 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AC138473.1-201ENST00000605717 526 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AC018926.3-201ENST00000618841 406 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 MIR561-201ENST00000385216 97 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AL589655.1-201ENST00000405398 482 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 RNA5SP511-201ENST00000410487 115 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA3Q99758 FO393419.3-201ENST00000428741 282 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
ABCA3Q99758 AL049734.2-201ENST00000441066 616 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 AC004865.1-201ENST00000442276 1003 ntBASIC0.89□□□□□ -2.27
ABCA3Q99758 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA3Q99758 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms