Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.1□□□□□ -2.23
IFT140Q96RY7 MIR7157-201ENST00000635801 60 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 ZNF663P-202ENST00000641770 1131 ntBASIC1.1□□□□□ -2.23
IFT140Q96RY7 MIR649-201ENST00000384843 97 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.09□□□□□ -2.24
IFT140Q96RY7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.09□□□□□ -2.24
IFT140Q96RY7 TAAR7P-201ENST00000436141 242 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.09□□□□□ -2.24
IFT140Q96RY7 RNA5SP337-201ENST00000517007 109 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.09□□□□□ -2.24
IFT140Q96RY7 OR6C7P-201ENST00000547875 934 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.09□□□□□ -2.24
IFT140Q96RY7 AC105224.1-201ENST00000587055 421 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 AC021646.1-201ENST00000605469 484 ntBASIC1.09□□□□□ -2.24
IFT140Q96RY7 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 SNORD82-201ENST00000365530 70 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
IFT140Q96RY7 TAF9BP2-201ENST00000400856 499 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 RNA5SP511-201ENST00000410487 115 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 MICF-203ENST00000432679 129 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 RNU6-27P-201ENST00000516146 107 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 AL391261.3-201ENST00000557194 520 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.08□□□□□ -2.24
IFT140Q96RY7 AL049641.1-201ENST00000441055 1948 ntBASIC1.08□□□□□ -2.24
IFT140Q96RY7 RNU6-1155P-201ENST00000363554 107 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 RNU6-1151P-201ENST00000384684 107 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AL356421.1-201ENST00000403255 413 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AL589655.1-201ENST00000405398 482 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC068135.1-201ENST00000446164 246 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 HMGN3P1-201ENST00000453847 193 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 MRPS17P3-201ENST00000465453 385 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC015724.1-201ENST00000478577 156 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC112198.4-201ENST00000515450 351 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.07□□□□□ -2.24
IFT140Q96RY7 OR8K4P-201ENST00000534608 872 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC015688.2-201ENST00000584523 262 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AP001485.1-201ENST00000604799 199 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC069294.1-201ENST00000608397 350 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AP003400.5-201ENST00000624827 617 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AC017104.5-201ENST00000637647 639 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
IFT140Q96RY7 MTND4P12-201ENST00000498999 1377 ntBASIC1.07□□□□□ -2.24
IFT140Q96RY7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AL590383.1-201ENST00000428602 75 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC092685.1-201ENST00000447960 1243 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AP003355.1-201ENST00000518956 587 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 HAUS1P3-201ENST00000523909 662 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC008121.1-201ENST00000603244 268 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC008498.1-201ENST00000613012 531 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC006213.4-201ENST00000616184 634 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 U4atac.1-201ENST00000618345 95 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 AC091925.2-201ENST00000625059 256 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 MTND5P31-201ENST00000419366 1374 ntBASIC1.06□□□□□ -2.24
IFT140Q96RY7 RNU6-222P-201ENST00000362438 107 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 RNU1-72P-201ENST00000362976 153 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 U3.13-201ENST00000364804 214 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AL355615.1-201ENST00000406187 641 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 RNU2-49P-201ENST00000410666 184 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AL049734.2-201ENST00000441066 616 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 RPL39P29-201ENST00000447779 157 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 FAM206BP-201ENST00000510179 541 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 AL137246.1-201ENST00000607072 977 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC090132.2-201ENST00000615881 347 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
IFT140Q96RY7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IFT140Q96RY7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IFT140Q96RY7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
IFT140Q96RY7 RNU6-750P-201ENST00000390946 107 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 HMGN2P39-201ENST00000398005 273 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC098934.3-201ENST00000430450 190 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 RPL31P35-201ENST00000431058 377 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC138853.1-201ENST00000503549 823 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AF213884.2-201ENST00000510417 903 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 RNU6-491P-201ENST00000516099 110 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 LSM6P2-201ENST00000552208 177 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AC074051.3-201ENST00000570238 358 ntBASIC1.05□□□□□ -2.24
IFT140Q96RY7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.05□□□□□ -2.24
IFT140Q96RY7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.04□□□□□ -2.24
IFT140Q96RY7 RPS15AP5-201ENST00000436276 388 ntBASIC1.04□□□□□ -2.24
IFT140Q96RY7 AC092393.1-201ENST00000439625 742 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms