Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SYNGAP1Q96PV0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 AL451142.2-201ENST00000429076 2090 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 RNA5SP72-201ENST00000364442 117 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 SNORA73.2-201ENST00000364946 201 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 SNORA31.3-201ENST00000516029 96 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-111P-201ENST00000517179 105 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 HSPE1P5-201ENST00000561489 272 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 MIR5685-201ENST00000579080 79 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 MIR6500-201ENST00000622700 86 ntBASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SYNGAP1Q96PV0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SAGE2P-201ENST00000420011 2126 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 UBE2L2-201ENST00000254302 429 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-212P-201ENST00000362642 104 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-1317P-201ENST00000364582 104 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-76P-201ENST00000384060 104 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SNORA70E-201ENST00000384492 135 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SNORA69.1-201ENST00000390904 137 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-700P-201ENST00000391043 107 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SAR1AP2-201ENST00000392696 594 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-607P-201ENST00000411283 108 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 PIGPP3-201ENST00000425307 415 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 AL590399.6-201ENST00000446396 307 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 AL590664.1-201ENST00000448065 339 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 AL049873.1-201ENST00000480540 376 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-182P-201ENST00000516970 105 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 AC123912.5-201ENST00000605470 343 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 AC098479.1-201ENST00000609225 154 ntBASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNGAP1Q96PV0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RPL9P7-201ENST00000330965 580 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-512P-201ENST00000364438 103 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-33P-201ENST00000384793 107 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-882P-201ENST00000391025 103 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RNU6-837P-201ENST00000391056 108 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 HSPE1P12-201ENST00000412576 301 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 EI24P1-201ENST00000416584 867 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC139712.2-201ENST00000424302 339 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AL138785.1-201ENST00000425821 331 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AL513043.1-201ENST00000439124 535 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RPL9P9-202ENST00000466501 579 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC108145.1-201ENST00000503770 153 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 RN7SKP40-201ENST00000517211 242 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC069240.1-201ENST00000548774 375 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 LRRC37A5P-203ENST00000580181 585 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC012433.1-201ENST00000588916 398 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC067852.4-201ENST00000590314 478 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AL158827.2-201ENST00000602494 330 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AC006023.2-201ENST00000609916 167 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 AL691447.3-201ENST00000635020 330 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 U2.22-201ENST00000636441 106 ntBASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNGAP1Q96PV0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SYNGAP1Q96PV0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms