Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 RPL17P36-201ENST00000420302 549 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC016831.4-201ENST00000438302 307 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC124916.1-201ENST00000444020 547 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 TMSB4XP3-201ENST00000445144 114 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 snoU13.4-201ENST00000458916 104 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 snoU13.30-201ENST00000458951 104 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 SEPT14P8-201ENST00000508026 178 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 SNORA31.8-201ENST00000516327 108 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 RNU6-1012P-201ENST00000516606 109 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC008745.1-201ENST00000604064 271 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC099506.2-201ENST00000623074 221 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AC097372.5-201ENST00000623665 376 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 RNU1-108P-201ENST00000362556 161 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 RNU6-72P-201ENST00000384285 79 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 HDGFP1-201ENST00000405943 252 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 RNU6-1140P-201ENST00000410517 106 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC098831.1-201ENST00000440661 216 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 SNORD108-201ENST00000459332 71 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 TOMM22P6-201ENST00000465035 409 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 RNU6-496P-201ENST00000516145 99 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 SNORA70.16-201ENST00000516390 95 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC087441.2-201ENST00000529141 262 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC024405.2-202ENST00000532731 184 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC023824.2-201ENST00000566185 400 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 MIR4284-201ENST00000578924 81 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 Z83818.1-201ENST00000603584 150 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 MIR6853-201ENST00000619642 74 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 SCARNA4-202ENST00000625402 129 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT43Q96FT9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 AC139713.2-214ENST00000642059 1811 ntBASIC4.79□□□□□ -1.64
IFT43Q96FT9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT43Q96FT9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 RNU1-83P-201ENST00000363426 164 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 RNU6-290P-201ENST00000365212 101 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 RNA5SP240-201ENST00000365355 128 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 RNU2-20P-201ENST00000410425 191 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 AL645608.4-201ENST00000423619 154 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 RPS26P2-201ENST00000440331 348 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC079168.2-201ENST00000453977 416 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 RN7SL459P-201ENST00000481078 302 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 MRPS36P4-201ENST00000534436 298 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.78□□□□□ -1.64
IFT43Q96FT9 TRAV28-201ENST00000557548 323 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 MIR548AI-201ENST00000579940 88 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 MIR4659A-201ENST00000580269 81 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 MIR378J-201ENST00000611988 109 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 ZFRP1-201ENST00000457579 2970 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 AC233981.2-201ENST00000611524 1614 ntBASIC4.78□□□□□ -1.64
IFT43Q96FT9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IFT43Q96FT9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.77□□□□□ -1.65
IFT43Q96FT9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
IFT43Q96FT9 RNU4-90P-201ENST00000362773 141 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 SNORA70F-201ENST00000384142 135 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 RNU6-937P-201ENST00000384325 106 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
IFT43Q96FT9 AL590762.2-201ENST00000395798 571 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 AL358453.1-201ENST00000422522 250 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 Z82188.1-201ENST00000436709 154 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 COX6CP14-201ENST00000469580 174 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 AP006245.1-201ENST00000522549 120 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 AC053481.4-201ENST00000583164 216 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 MIR7154-201ENST00000620673 73 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 U6.99-201ENST00000637524 83 ntBASIC4.77□□□□□ -1.65
IFT43Q96FT9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms