Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR7975-201ENST00000619350 68 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 AL606534.2-204ENST00000635008 178 ntBASIC3.89□□□□□ -1.79
CHFRQ96EP1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHFRQ96EP1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHFRQ96EP1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CHFRQ96EP1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHFRQ96EP1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHFRQ96EP1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHFRQ96EP1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU6-562P-201ENST00000362731 107 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 Y_RNA.152-201ENST00000363578 100 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 Y_RNA.291-201ENST00000364886 113 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 SNORD115-7-201ENST00000365306 82 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 Y_RNA.376-201ENST00000365638 108 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU6-746P-201ENST00000384112 109 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 Y_RNA.785-201ENST00000384290 109 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU6-441P-201ENST00000384545 106 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 MIR649-201ENST00000384843 97 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 MIR1252-201ENST00000408861 65 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AL137014.1-201ENST00000420490 1226 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 MRPS18CP6-201ENST00000423587 223 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 AL590632.1-201ENST00000424289 371 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 RPL36P19-201ENST00000430744 301 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC011816.1-201ENST00000441346 546 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 FTH1P25-201ENST00000447665 469 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC114801.2-201ENST00000503825 781 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC022447.4-201ENST00000504053 364 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU6-189P-201ENST00000516120 101 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 SCARNA16.2-201ENST00000516520 172 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 RNU6-111P-201ENST00000517179 105 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 IGHV3-76-201ENST00000522465 295 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC007458.1-201ENST00000542812 373 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 LSM6P2-201ENST00000552208 177 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 AL713866.2-201ENST00000603579 219 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC096772.1-201ENST00000609146 564 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHFRQ96EP1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC011460.1-201ENST00000636268 1834 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC091152.2-201ENST00000591628 2569 ntBASIC3.88□□□□□ -1.79
CHFRQ96EP1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 RNU6-50P-201ENST00000362356 103 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 Y_RNA.150-201ENST00000363562 102 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 Y_RNA.234-201ENST00000364409 97 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 RNU6-713P-201ENST00000384761 107 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 RNVU1-14-201ENST00000384770 164 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 MIR490-201ENST00000384865 128 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 MIR19A-201ENST00000384878 82 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 MIR591-201ENST00000385290 95 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 U3.20-201ENST00000390909 217 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 MIR1302-6-201ENST00000408466 90 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 AL590233.1-201ENST00000430017 456 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 RPS3AP12-201ENST00000443616 753 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 PRELID3BP1-201ENST00000457142 540 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC074250.1-201ENST00000511117 192 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 RN7SKP18-201ENST00000516005 275 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 RNU6-182P-201ENST00000516970 105 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 AL360157.1-201ENST00000565962 87 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 SNORA62.6-201ENST00000606322 83 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.87□□□□□ -1.79
CHFRQ96EP1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHFRQ96EP1 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
CHFRQ96EP1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.86□□□□□ -1.79
CHFRQ96EP1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHFRQ96EP1 AC009902.3-201ENST00000606235 2172 ntBASIC3.86□□□□□ -1.79
CHFRQ96EP1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms