Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORD14B-201ENST00000364533 90 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 RNVU1-14-201ENST00000384770 164 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 Y_RNA.576-201ENST00000384781 102 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 MIR34A-201ENST00000385130 110 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 RNU6-220P-201ENST00000390919 107 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AL356967.1-201ENST00000406305 431 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 U3.37-201ENST00000408528 213 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC104058.1-201ENST00000448028 297 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 RPL31P3-201ENST00000458430 332 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC009812.2-201ENST00000517657 457 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 MTCO2P4-201ENST00000517968 247 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AL356057.1-201ENST00000533798 831 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC023824.2-201ENST00000566185 400 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 MIR3913-1-201ENST00000577744 102 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AL670379.4-201ENST00000605279 254 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AL021997.1-201ENST00000605757 193 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC005046.1-201ENST00000608515 625 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC005332.10-201ENST00000612725 619 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC092656.1-203ENST00000624134 423 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 U6.114-201ENST00000636407 96 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
VPS33AQ96AX1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 SNORD3E-201ENST00000362899 217 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 RNU6-348P-201ENST00000384386 107 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR578-201ENST00000384828 96 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 U6atac.2-201ENST00000408644 118 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 BX276092.3-201ENST00000424182 230 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 KLF3P2-201ENST00000465138 268 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 RN7SL297P-201ENST00000483161 293 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC018437.1-201ENST00000492214 406 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 HMGB1P30-201ENST00000492455 606 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC117522.3-201ENST00000507974 584 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC104806.1-201ENST00000508720 308 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 RNU6-430P-201ENST00000517078 107 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 OR5AL2P-201ENST00000532185 920 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC012213.3-201ENST00000577199 777 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR5692A1-201ENST00000580523 69 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AL670379.10-201ENST00000604330 253 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AL670379.9-201ENST00000605428 253 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AL359740.1-201ENST00000624340 592 ntBASIC2.71□□□□□ -1.98
VPS33AQ96AX1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS33AQ96AX1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AL390237.1-201ENST00000404226 1415 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 RNU6-371P-201ENST00000364283 108 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 CIR1P3-201ENST00000405137 479 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 MIR1302-8-201ENST00000408342 128 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 OR6C66P-201ENST00000414917 930 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC016831.2-201ENST00000417179 352 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AL353621.1-201ENST00000418219 243 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 Z98742.2-201ENST00000431564 187 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms