Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC083904.1-201ENST00000487828 231 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC022493.1-201ENST00000492984 337 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 RN7SKP256-201ENST00000517201 314 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AC025755.1-201ENST00000521306 278 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AC243972.3-201ENST00000539655 198 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.77□□□□□ -1.81
HPS3Q969F9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AC096577.2-201ENST00000611455 153 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC022306.2-201ENST00000617563 647 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AL136221.1-201ENST00000621449 509 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC091953.5-201ENST00000622919 233 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 AC073308.1-201ENST00000623696 305 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HPS3Q969F9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HPS3Q969F9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.77□□□□□ -1.81
HPS3Q969F9 AC073346.2-201ENST00000624724 2058 ntBASIC3.77□□□□□ -1.81
HPS3Q969F9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HPS3Q969F9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.76□□□□□ -1.81
HPS3Q969F9 AC007256.1-201ENST00000392253 2765 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 U3.12-201ENST00000364498 214 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 MIR491-201ENST00000384877 84 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HPS3Q969F9 MIR888-201ENST00000401186 77 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.76□□□□□ -1.81
HPS3Q969F9 RPLP0P7-201ENST00000416050 667 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AL353621.1-201ENST00000418219 243 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 HMGN2P30-201ENST00000423237 256 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.76□□□□□ -1.81
HPS3Q969F9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.76□□□□□ -1.81
HPS3Q969F9 HMGN2P20-201ENST00000437531 273 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 BRK1P2-201ENST00000442875 223 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.76□□□□□ -1.81
HPS3Q969F9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.76□□□□□ -1.81
HPS3Q969F9 RPL21P13-201ENST00000488305 481 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC139453.3-201ENST00000493276 369 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 FAM206BP-201ENST00000510179 541 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.76□□□□□ -1.81
HPS3Q969F9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.76□□□□□ -1.81
HPS3Q969F9 CYCSP27-201ENST00000527643 293 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HPS3Q969F9 AC087241.2-201ENST00000535801 324 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC090115.3-201ENST00000553218 849 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 TRAV37-201ENST00000553906 342 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 MIR4474-201ENST00000579189 78 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC073539.2-201ENST00000597113 165 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 HSPE1P7-201ENST00000604681 321 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC012468.1-201ENST00000604888 430 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AL138880.2-201ENST00000616214 239 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC009248.2-201ENST00000619826 254 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 AC006111.3-201ENST00000622137 383 ntBASIC3.76□□□□□ -1.81
HPS3Q969F9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.76□□□□□ -1.81
HPS3Q969F9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.76□□□□□ -1.81
HPS3Q969F9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HPS3Q969F9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HPS3Q969F9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HPS3Q969F9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HPS3Q969F9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HPS3Q969F9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HPS3Q969F9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.75□□□□□ -1.81
HPS3Q969F9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HPS3Q969F9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HPS3Q969F9 RNU6-845P-201ENST00000362578 103 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 SNORD113-7-201ENST00000363762 77 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.75□□□□□ -1.81
HPS3Q969F9 SNORA9-201ENST00000384215 133 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 MIR218-2-201ENST00000385006 110 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HPS3Q969F9 EI24P2-201ENST00000397776 1076 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 AL356968.1-201ENST00000416622 474 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 HMGN1P12-201ENST00000499125 195 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 MTND3P25-201ENST00000509243 135 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 AC069113.1-201ENST00000517763 267 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.75□□□□□ -1.81
HPS3Q969F9 AC025253.1-201ENST00000613623 543 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 AL031601.2-202ENST00000622650 282 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.75□□□□□ -1.81
HPS3Q969F9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.75□□□□□ -1.81
HPS3Q969F9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HPS3Q969F9 MTND5P1-201ENST00000445440 1375 ntBASIC3.75□□□□□ -1.81
HPS3Q969F9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HPS3Q969F9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 RNU6-607P-201ENST00000411283 108 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.74□□□□□ -1.81
HPS3Q969F9 AC126124.2-201ENST00000413542 321 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.74□□□□□ -1.81
HPS3Q969F9 HSPE1P1-201ENST00000421494 318 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AL645937.1-202ENST00000421799 937 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 MTCO3P46-201ENST00000425787 232 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.74□□□□□ -1.81
HPS3Q969F9 AC007560.1-201ENST00000426912 237 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 RPL23AP82-202ENST00000427528 469 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 TOMM20P4-201ENST00000427861 435 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 NDUFA5P4-201ENST00000436704 385 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms