Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.22□□□□□ -1.73
RTF1Q92541 uc_338.15-201ENST00000615470 191 ntBASIC4.22□□□□□ -1.73
RTF1Q92541 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTF1Q92541 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RTF1Q92541 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RTF1Q92541 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
RTF1Q92541 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RTF1Q92541 DEFB108F-201ENST00000344638 222 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 RNU5A-1-201ENST00000362698 116 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 MIR184-201ENST00000384962 84 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 SNORD70.1-201ENST00000391007 85 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 CISD1P1-201ENST00000393907 327 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 RNA5SP229-201ENST00000410809 99 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 BX682237.1-201ENST00000415016 335 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AC092809.3-201ENST00000415453 231 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AL353705.1-201ENST00000433468 480 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AL591212.2-201ENST00000433923 257 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AC236972.2-201ENST00000434979 310 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.21□□□□□ -1.74
RTF1Q92541 AC108860.1-201ENST00000484521 383 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 RNU6-927P-201ENST00000516199 100 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 RNU2-58P-201ENST00000516403 183 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.21□□□□□ -1.74
RTF1Q92541 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.21□□□□□ -1.74
RTF1Q92541 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.21□□□□□ -1.74
RTF1Q92541 AP000763.2-201ENST00000540641 163 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.21□□□□□ -1.74
RTF1Q92541 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.21□□□□□ -1.74
RTF1Q92541 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.21□□□□□ -1.74
RTF1Q92541 U2.17-201ENST00000611454 95 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AC018692.3-201ENST00000623929 123 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 AL353743.1-202ENST00000431724 1695 ntBASIC4.21□□□□□ -1.74
RTF1Q92541 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RTF1Q92541 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
RTF1Q92541 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTF1Q92541 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTF1Q92541 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTF1Q92541 MIR30E-201ENST00000362104 92 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 Y_RNA.212-201ENST00000364177 102 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 RNU6-1181P-201ENST00000384191 106 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 RNU6-434P-201ENST00000384376 107 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 RNU6-393P-201ENST00000384475 107 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR1302-11-201ENST00000408051 138 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR1302-9-201ENST00000408365 138 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR1302-10-201ENST00000408734 138 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AL513331.1-201ENST00000411908 397 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.2□□□□□ -1.74
RTF1Q92541 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.2□□□□□ -1.74
RTF1Q92541 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.2□□□□□ -1.74
RTF1Q92541 HMGB3P11-201ENST00000440127 604 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MRPS31P2-201ENST00000451581 518 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC006445.1-201ENST00000491925 405 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC090115.3-201ENST00000553218 849 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.2□□□□□ -1.74
RTF1Q92541 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.2□□□□□ -1.74
RTF1Q92541 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.2□□□□□ -1.74
RTF1Q92541 MIR3941-201ENST00000582572 103 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR4325-201ENST00000583049 90 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR3942-201ENST00000585264 109 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 MIR1302-2-201ENST00000607096 138 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC022893.3-201ENST00000607665 437 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC034102.8-201ENST00000615146 484 ntBASIC4.2□□□□□ -1.74
RTF1Q92541 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.2□□□□□ -1.74
RTF1Q92541 AF127577.6-201ENST00000623352 2191 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 SNORA16.2-201ENST00000390991 127 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RPS12P24-201ENST00000412619 387 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 TOMM22P1-201ENST00000418578 312 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.19□□□□□ -1.74
RTF1Q92541 AL136097.1-201ENST00000456945 913 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RNU7-167P-201ENST00000459160 62 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 Y_RNA.632-201ENST00000459189 102 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RNU7-170P-201ENST00000459303 61 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 DYNLL1P5-201ENST00000467158 270 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 AC021205.2-201ENST00000480069 347 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.19□□□□□ -1.74
RTF1Q92541 AC104136.1-201ENST00000512969 394 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RNU6-1153P-201ENST00000516760 105 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.19□□□□□ -1.74
RTF1Q92541 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.19□□□□□ -1.74
RTF1Q92541 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.19□□□□□ -1.74
RTF1Q92541 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.19□□□□□ -1.74
RTF1Q92541 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.19□□□□□ -1.74
RTF1Q92541 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.19□□□□□ -1.74
RTF1Q92541 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.19□□□□□ -1.74
RTF1Q92541 AL133255.1-201ENST00000606374 441 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RMST_8.1-201ENST00000610287 165 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.19□□□□□ -1.74
RTF1Q92541 AL162274.2-201ENST00000614406 332 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 U6.98-201ENST00000637157 84 ntBASIC4.19□□□□□ -1.74
RTF1Q92541 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTF1Q92541 AC058791.1-201ENST00000608412 3198 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 RNU6-254P-201ENST00000363377 107 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 RNU6-288P-201ENST00000363690 104 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 RNU6-715P-201ENST00000365204 103 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 Y_RNA.339-201ENST00000365325 102 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 RNU6-1227P-201ENST00000383981 107 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms