Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SNIP1Q8TAD8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.97□□□□□ -1.61
SNIP1Q8TAD8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SNIP1Q8TAD8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 U3.3-201ENST00000362986 216 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AC068538.1-201ENST00000376856 336 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RNU6-969P-201ENST00000383900 105 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RNU6-1310P-201ENST00000384153 107 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 ELOCP21-201ENST00000412558 336 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RPL18P10-201ENST00000425606 538 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RPS27P1-201ENST00000450552 247 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RPL30P12-201ENST00000474666 353 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AC140172.1-201ENST00000502928 141 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RNU6-436P-201ENST00000516171 114 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 SNORA43.2-201ENST00000516652 128 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 PARP1P2-201ENST00000556806 195 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 MIR4660-201ENST00000583549 74 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AL391261.4-201ENST00000616012 481 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AL591926.8-201ENST00000616876 211 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 MIR6758-201ENST00000620653 63 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 AC027309.3-201ENST00000623419 351 ntBASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNIP1Q8TAD8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 A2MP1-204ENST00000566278 4130 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 RNA5SP326-201ENST00000363209 110 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 SNORD32A-201ENST00000364805 84 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 RNU6-294P-201ENST00000364999 102 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 Y_RNA.393-201ENST00000383936 102 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 MIR548A3-201ENST00000385297 97 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 MT-TT-201ENST00000387460 66 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC112220.1-201ENST00000434628 355 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AL135790.2-201ENST00000437701 267 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 RNU6-561P-201ENST00000516222 102 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 RNA5SP290-201ENST00000517133 127 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AP003327.1-201ENST00000529684 127 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC016256.1-201ENST00000547971 354 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC091042.1-201ENST00000579213 173 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AC010329.5-201ENST00000623497 2174 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 AP001029.2-203ENST00000589795 4910 ntBASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNIP1Q8TAD8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 AC018529.3-201ENST00000624212 2254 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 AC093535.2-201ENST00000624769 2326 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 OR4F13P-202ENST00000560066 2054 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 Y_RNA.179-201ENST00000363844 90 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 RNU6-324P-201ENST00000363957 106 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 RNU1-136P-201ENST00000384181 164 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 MIR1182-201ENST00000408363 97 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 RPL26P27-201ENST00000414397 437 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 CYCSP49-201ENST00000420810 319 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 AC137627.1-201ENST00000545761 289 ntBASIC4.94□□□□□ -1.62
SNIP1Q8TAD8 AC107016.1-201ENST00000550463 337 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms