Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNA5SP21-201ENST00000410917 96 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 OR51A5P-201ENST00000415429 942 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 MRPL50P2-201ENST00000416821 482 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 OOSP1P1-201ENST00000423265 274 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 HMGB1P27-201ENST00000431429 603 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 RPL36AP6-201ENST00000435770 321 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 Z82210.1-201ENST00000440037 231 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AL118520.1-201ENST00000450770 291 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 RNU7-63P-201ENST00000459054 62 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC098591.2-201ENST00000510152 315 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 RNU4-29P-201ENST00000515943 174 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 SNORA40.12-201ENST00000516329 111 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 RNU6-677P-201ENST00000516914 101 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 OR5AQ1P-201ENST00000527596 927 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AP005435.4-201ENST00000529514 284 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 MIR3609-201ENST00000582661 80 ntBASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC01006Q8NI28 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 MAPK10-362ENST00000641864 4484 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 MTND5P17-201ENST00000418405 1603 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 Y_RNA.450-201ENST00000384198 113 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNU6-606P-201ENST00000384721 111 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNU1-101P-201ENST00000391171 127 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC245054.2-201ENST00000415639 319 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL109913.1-201ENST00000421173 514 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 EIF1P1-201ENST00000421436 341 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 CALM2P2-201ENST00000428512 440 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC016691.1-201ENST00000441321 413 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC073415.1-201ENST00000449240 153 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 CECR9-201ENST00000453421 199 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL356010.1-201ENST00000456364 102 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNU7-182P-201ENST00000459009 62 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC087588.1-201ENST00000462203 316 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC083798.1-201ENST00000472671 131 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC092989.1-201ENST00000481235 277 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC092185.1-201ENST00000491371 97 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC104806.1-201ENST00000508720 308 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AF213884.2-201ENST00000510417 903 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNU6-914P-201ENST00000516749 109 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNU6-928P-201ENST00000516876 104 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNA5SP503-201ENST00000517047 117 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 RNA5SP290-201ENST00000517133 127 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC068657.1-201ENST00000520807 306 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 IGHV3-76-201ENST00000522465 295 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 ZNF519P2-201ENST00000557032 169 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC025678.1-201ENST00000567861 338 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 MIR4703-201ENST00000577728 79 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 BNIP3P30-201ENST00000601184 574 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 MIR15A-201ENST00000607334 83 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AL354950.2-201ENST00000617939 290 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC010338.1-201ENST00000621823 717 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC092608.2-201ENST00000624427 218 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC005609.4-201ENST00000625071 447 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 Z99571.1-201ENST00000636677 394 ntBASIC2.18□□□□□ -2.06
LINC01006Q8NI28 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC01006Q8NI28 AC110774.1-201ENST00000623567 2018 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms