Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCDC89Q8N998 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC89Q8N998 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC89Q8N998 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 RNU4-21P-201ENST00000362802 126 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 RNU6-61P-201ENST00000365528 109 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 SNORA40.3-201ENST00000390964 122 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AL049545.1-201ENST00000401856 572 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AL139095.1-201ENST00000404326 391 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 RPS6P15-201ENST00000431996 751 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 CYP2C59P-201ENST00000457790 269 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 RPL7P43-201ENST00000478876 753 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC116562.3-201ENST00000506136 177 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 HMGB3P3-201ENST00000510526 400 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC114781.4-201ENST00000513707 639 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 RNA5SP367-201ENST00000516557 118 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 SCARNA13-201ENST00000516672 275 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC068587.5-201ENST00000528506 175 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 RANP3-201ENST00000530970 276 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC027176.1-201ENST00000560204 514 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC008521.1-201ENST00000587471 187 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC068276.1-201ENST00000605793 379 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC245884.12-201ENST00000615364 59 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AP001506.1-201ENST00000615444 211 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC138649.3-201ENST00000622154 254 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC025034.2-201ENST00000623264 286 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC091931.1-201ENST00000623488 728 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AP000770.2-201ENST00000623694 100 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC006020.1-201ENST00000420179 1854 ntBASIC2.87□□□□□ -1.95
CCDC89Q8N998 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC89Q8N998 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC89Q8N998 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 SNORD114-19-201ENST00000363072 75 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 RNA5SP240-201ENST00000365355 128 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 RNU6-1179P-201ENST00000384667 107 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 MIR10A-201ENST00000385043 110 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 AL445567.1-201ENST00000439121 144 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 MRPL50P4-201ENST00000446432 475 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC009961.3-201ENST00000449832 765 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 KLF3P2-201ENST00000465138 268 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 MED28P2-201ENST00000475771 317 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC004924.1-201ENST00000480160 781 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 RBBP4P6-201ENST00000508098 202 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC117522.2-201ENST00000510049 657 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC118465.1-201ENST00000513820 1271 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 RNU6-1220P-201ENST00000517126 108 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AP004607.1-201ENST00000524456 203 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC89Q8N998 PSMA3P-201ENST00000555485 635 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 RPS15AP11-201ENST00000594193 385 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC090578.1-201ENST00000604955 591 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC069200.1-201ENST00000609511 323 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC009233.1-201ENST00000616477 371 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 AC110994.2-201ENST00000635481 492 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC89Q8N998 FARSBP1-201ENST00000435808 1778 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.86□□□□□ -1.95
CCDC89Q8N998 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC89Q8N998 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCDC89Q8N998 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC89Q8N998 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC89Q8N998 SNORD14B-201ENST00000364533 90 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 RNU6-72P-201ENST00000384285 79 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 RN7SKP158-201ENST00000410453 326 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC89Q8N998 AC107081.1-201ENST00000414975 361 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC89Q8N998 NUP35P1-201ENST00000422734 947 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC89Q8N998 CALM2P2-201ENST00000428512 440 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 AC016691.1-201ENST00000441321 413 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC89Q8N998 AC124916.1-201ENST00000444020 547 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.85□□□□□ -1.95
CCDC89Q8N998 snoU109.2-201ENST00000459316 135 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms