Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AL031183.1-201ENST00000457667 207 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 RPL23AP45-201ENST00000476406 468 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC025554.1-201ENST00000505641 188 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 HMGN1P13-201ENST00000505795 138 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AK3P2-201ENST00000507976 429 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 NACAP3-201ENST00000552100 481 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC100830.2-201ENST00000581636 240 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC064801.1-201ENST00000612025 407 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC126177.8-201ENST00000618339 1015 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 AC244517.12-201ENST00000623581 663 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 Z69720.2-201ENST00000624755 279 ntBASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.03□□□□□ -1.76
SYNPOQ8N3V7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AP001148.1-201ENST00000624124 2359 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNA5SP72-201ENST00000364442 117 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 SNORA9-201ENST00000384215 133 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNU6-72P-201ENST00000384285 79 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNU6-933P-201ENST00000384424 107 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNU6-1011P-201ENST00000384668 107 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 U8.11-201ENST00000384699 133 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 U8.12-201ENST00000384701 133 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 MTCYBP4-201ENST00000401524 249 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 SNORD56-201ENST00000413522 71 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 Z82205.1-201ENST00000428456 297 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNU7-187P-201ENST00000458985 68 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 U8.18-201ENST00000459285 133 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL451007.1-201ENST00000595491 289 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL133255.1-201ENST00000606374 441 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC012603.1-201ENST00000606424 528 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC019193.3-201ENST00000609144 554 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AL442067.2-201ENST00000614033 363 ntBASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNPOQ8N3V7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC066616.2-201ENST00000559334 1481 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 Y_RNA.151-201ENST00000363566 112 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 Z98749.2-208ENST00000381646 500 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 U3.37-201ENST00000408528 213 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RNA5SP31-201ENST00000411144 127 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RPS20P15-201ENST00000412792 311 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AL591419.1-201ENST00000427423 339 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 HIGD1AP2-201ENST00000446367 280 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RNU6-377P-201ENST00000515965 102 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RNA5SP164-201ENST00000516533 110 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC103996.1-201ENST00000555468 102 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC087499.8-201ENST00000578406 226 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AL160281.1-201ENST00000605307 311 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AL050343.2-201ENST00000607338 280 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 PISRT1.1-201ENST00000616930 107 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 SCARNA4-202ENST00000625402 129 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 MIR3199-2-201ENST00000636243 86 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 AC008725.1-201ENST00000605123 2263 ntBASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNPOQ8N3V7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4□□□□□ -1.77
SYNPOQ8N3V7 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
SYNPOQ8N3V7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNPOQ8N3V7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SYNPOQ8N3V7 SNORD62.1-201ENST00000362541 86 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms