Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-1007P-201ENST00000516586 107 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 AC103783.1-201ENST00000520506 373 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 AC105129.1-201ENST00000560250 297 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 DEFB117-201ENST00000602356 141 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 AC008121.1-201ENST00000603244 268 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 AC022441.3-201ENST00000605737 136 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 OR56B2P-202ENST00000641377 2453 ntBASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NPAS3Q8IXF0 LINC01109-201ENST00000603837 3081 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC063976.2-201ENST00000425667 3556 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC004817.4-201ENST00000602396 3625 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RNU6-103P-201ENST00000363686 107 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RNU6-640P-201ENST00000363693 105 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RNA5SP479-201ENST00000364858 117 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 FTLP19-201ENST00000433300 394 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC124916.1-201ENST00000444020 547 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC096638.1-201ENST00000444678 216 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 MRPL48P1-201ENST00000445390 636 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AL162591.2-201ENST00000449634 317 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RPL23AP49-201ENST00000492925 468 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 Y_RNA.685-201ENST00000516532 108 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 RNA5SP165-201ENST00000517142 115 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 OR4H12P-201ENST00000556269 907 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC005255.1-201ENST00000593748 216 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC123786.2-201ENST00000603459 275 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC005191.1-201ENST00000603950 358 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC025521.1-201ENST00000621624 286 ntBASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NPAS3Q8IXF0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AL136360.1-201ENST00000503377 1900 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 RNU6-768P-201ENST00000384683 107 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 Y_RNA.572-201ENST00000384757 98 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 HLFP1-201ENST00000402375 499 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 RNU6-592P-201ENST00000411333 103 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AP000907.1-201ENST00000428428 510 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AC004975.1-201ENST00000428733 208 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 RN7SL517P-201ENST00000462240 305 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 PPIAP21-201ENST00000464473 501 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 NIP7P2-201ENST00000485801 544 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 RNU6-453P-201ENST00000516819 85 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 RNU6-840P-201ENST00000517275 65 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AP001781.1-201ENST00000530977 207 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AL358913.1-201ENST00000554342 121 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 UBL5P4-201ENST00000562584 236 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AC093591.2-201ENST00000565254 3843 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 MIR4675-201ENST00000577898 77 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 NF1P5-201ENST00000588287 448 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AC002545.1-201ENST00000592511 181 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AL139395.1-201ENST00000603662 160 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AL121890.5-201ENST00000620848 304 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 SCARNA4-201ENST00000629045 128 ntBASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS3Q8IXF0 AC009951.1-201ENST00000623674 2614 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 AP000756.2-201ENST00000624168 2567 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 RNU6-1164P-201ENST00000364428 107 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 Y_RNA.348-201ENST00000365403 103 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 MIR548A1-201ENST00000385041 97 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.93□□□□□ -1.62
NPAS3Q8IXF0 RN7SKP16-201ENST00000410180 299 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms