Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMGB3P12-201ENST00000438745 556 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 BRK1P2-201ENST00000442875 223 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 SSXP1-201ENST00000453640 473 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AP001324.2-201ENST00000461163 319 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC090515.1-201ENST00000465295 476 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC068587.2-201ENST00000478386 781 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 RNU4-29P-201ENST00000515943 174 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-678P-201ENST00000516832 109 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC091489.2-201ENST00000566263 604 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 MIR4765-201ENST00000585007 77 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 NRBF2P1-201ENST00000587407 859 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL365204.3-201ENST00000612448 685 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC010678.1-201ENST00000614118 713 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 CTSLP2-204ENST00000629029 392 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL512643.1-201ENST00000635735 524 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AC004944.1-201ENST00000517807 3059 ntBASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.11□□□□□ -2.07
NUDCD3Q8IVD9 AL445523.1-201ENST00000451184 1362 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 OR56A5-201ENST00000340110 738 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 RNU5F-6P-201ENST00000362979 116 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 MIR147B-201ENST00000390185 80 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 USP9YP6-201ENST00000413550 854 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC009963.1-201ENST00000417265 157 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AL591212.2-201ENST00000433923 257 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC068781.1-201ENST00000488231 618 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AF131216.2-201ENST00000512316 564 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-572P-201ENST00000516724 80 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC025755.1-201ENST00000521306 278 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AP001646.1-201ENST00000527936 915 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC234772.3-201ENST00000602277 528 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC009314.1-201ENST00000603871 304 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC130324.3-201ENST00000614165 542 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 AC098657.3-201ENST00000620434 263 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 FRG1KP-201ENST00000623592 341 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 MTND5P30-201ENST00000452896 1731 ntBASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NUDCD3Q8IVD9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 HSPE1P11-201ENST00000339579 310 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP125-201ENST00000364843 120 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-533P-201ENST00000384144 107 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC092809.3-201ENST00000415453 231 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 RPS15AP12-201ENST00000419498 388 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AL365184.2-201ENST00000431139 435 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 MTCYBP39-201ENST00000437562 491 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC112204.1-201ENST00000502591 103 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC114781.4-201ENST00000513707 639 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 RN7SKP265-201ENST00000516448 223 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 PCMTD1P2-201ENST00000565017 355 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 MIR4782-201ENST00000577987 79 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AF131215.7-201ENST00000602443 707 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC105129.3-201ENST00000605455 485 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC022893.3-201ENST00000607665 437 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms