Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RNU6-527P-201ENST00000363425 104 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.233-201ENST00000364407 101 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RNA5SP509-201ENST00000364577 119 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.292-201ENST00000364904 97 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 SNORA53-201ENST00000391141 249 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RAB9AP3-201ENST00000412737 573 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RPL21P66-201ENST00000426566 466 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 Z82210.1-201ENST00000440037 231 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RPL7AP61-201ENST00000443410 636 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AC009237.8-201ENST00000445492 379 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RAB9AP1-201ENST00000449393 573 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RPL23AP81-201ENST00000455252 467 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 BRDTP1-201ENST00000605735 677 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RPL23AP88-201ENST00000605759 454 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 RMST_6.1-201ENST00000611980 203 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 ZYXP1-201ENST00000617638 118 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 CR381572.2-201ENST00000624852 397 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AC241585.2-209ENST00000638217 143 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF135Q8IUD6 A2MP1-204ENST00000566278 4130 ntBASIC5.09□□□□□ -1.59
RNF135Q8IUD6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF135Q8IUD6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF135Q8IUD6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF135Q8IUD6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.09□□□□□ -1.6
RNF135Q8IUD6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC008568.2-201ENST00000623862 2313 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RNU6-926P-201ENST00000384075 107 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RNU6-843P-201ENST00000384454 104 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RNA5SP171-201ENST00000391071 115 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 U3.37-201ENST00000408528 213 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RNA5SP31-201ENST00000411144 127 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 COX6CP13-201ENST00000428703 226 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC016700.2-201ENST00000446011 156 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AL691482.1-201ENST00000453255 87 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC006026.2-201ENST00000457376 180 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RPL31P13-201ENST00000484151 370 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 RPL23AP49-201ENST00000492925 468 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 HMGB3P16-201ENST00000508037 287 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 SNORA43.2-201ENST00000516652 128 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 CYCSP29-201ENST00000533731 318 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 MIR3936-201ENST00000584304 110 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 AC023043.4-201ENST00000612081 449 ntBASIC5.08□□□□□ -1.6
RNF135Q8IUD6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF135Q8IUD6 OR56B2P-202ENST00000641377 2453 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 AC008725.1-201ENST00000605123 2263 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SNORD115-32-201ENST00000364079 82 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 RNU6-1286P-201ENST00000383871 107 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 RNU6-1168P-201ENST00000390831 104 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SNORA11F-201ENST00000408237 128 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 Y_RNA.629-201ENST00000411368 105 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 RPS5P7-201ENST00000456664 608 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SCARNA22-201ENST00000503991 125 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 AC024153.1-201ENST00000603103 365 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 FAM27B-201ENST00000610601 213 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 AC112200.1-201ENST00000625015 234 ntBASIC5.07□□□□□ -1.6
RNF135Q8IUD6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF135Q8IUD6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms