Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RN7SL303P-201ENST00000469773 251 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 MIR4659A-201ENST00000580269 81 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 CPHL1P-201ENST00000461341 3407 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 SNORD113-8-201ENST00000363497 74 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 RNY1-201ENST00000364228 113 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 RNU6-968P-201ENST00000384076 107 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 Y_RNA.581-201ENST00000391017 97 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AC022795.1-201ENST00000473808 480 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 RN7SL810P-201ENST00000493031 276 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 CYCSP29-201ENST00000533731 318 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 TOMM20P2-201ENST00000540082 421 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AC120057.2-201ENST00000571520 271 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AC010928.2-201ENST00000588017 287 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AC068724.3-201ENST00000625906 87 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 AP001273.1-201ENST00000624493 3152 ntBASIC5.02□□□□□ -1.61
TRIM50Q86XT4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM50Q86XT4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 SDHCP2-201ENST00000398565 501 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 RNA5SP31-201ENST00000411144 127 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC011998.1-201ENST00000433403 117 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC009296.1-201ENST00000443146 155 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 PHBP16-201ENST00000446318 950 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 HMGN2P21-201ENST00000447764 270 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AL353705.4-201ENST00000449661 238 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 RPS26P21-201ENST00000475397 348 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 RPS23P5-201ENST00000495419 428 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 UBE2CP3-201ENST00000502715 450 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 RN7SKP21-201ENST00000516503 220 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 RNU6-1012P-201ENST00000516606 109 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC107016.1-201ENST00000550463 337 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC012603.1-201ENST00000606424 528 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC241585.2-209ENST00000638217 143 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM50Q86XT4 AC087190.4-201ENST00000574616 8334 ntBASIC5.01□□□□□ -1.61
TRIM50Q86XT4 SALL4P2-201ENST00000423288 2910 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 AC015813.6-201ENST00000624409 5808 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM50Q86XT4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 RNU6-1301P-201ENST00000362724 104 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 RNU1-35P-201ENST00000362782 153 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 Y_RNA.180-201ENST00000363867 113 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 Y_RNA.200-201ENST00000364018 102 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 RNA5SP515-201ENST00000364570 118 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 RNU6-926P-201ENST00000384075 107 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 RNU6-140P-201ENST00000384566 108 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 SNORD58.1-201ENST00000391313 66 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 U3.37-201ENST00000408528 213 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 SNORA11-201ENST00000408789 128 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5□□□□□ -1.61
TRIM50Q86XT4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5□□□□□ -1.61
TRIM50Q86XT4 CYCSP32-201ENST00000440548 321 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 SNORA43.2-201ENST00000516652 128 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5□□□□□ -1.61
TRIM50Q86XT4 CYCSP39-201ENST00000565821 309 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5□□□□□ -1.61
TRIM50Q86XT4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM50Q86XT4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5□□□□□ -1.61
TRIM50Q86XT4 AC125257.1-201ENST00000560400 2930 ntBASIC5□□□□□ -1.61
TRIM50Q86XT4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5□□□□□ -1.61
TRIM50Q86XT4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 AL672167.1-203ENST00000641299 2975 ntBASIC4.99□□□□□ -1.61
TRIM50Q86XT4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM50Q86XT4 RNU6-102P-201ENST00000384485 104 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms