Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC012435.1-202ENST00000568772 240 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 MTND4LP25-201ENST00000570218 163 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC007151.1-201ENST00000572774 483 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC091152.3-201ENST00000604227 325 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC104763.3-201ENST00000613765 618 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC107308.1-201ENST00000615897 301 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC018926.1-201ENST00000616335 435 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC007490.1-201ENST00000624321 703 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 AC079416.3-201ENST00000624479 549 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LRRC28Q86X40 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.35□□□□□ -2.19
LRRC28Q86X40 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LRRC28Q86X40 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 RNU6-777P-201ENST00000364265 104 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 U3.13-201ENST00000364804 214 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 RNU6-744P-201ENST00000365557 107 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 RNU6-1316P-201ENST00000384242 108 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 Y_RNA.578-201ENST00000390903 88 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 U6atac.2-201ENST00000408644 118 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 BX510359.4-201ENST00000423750 193 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 RPS3AP44-201ENST00000425466 790 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 ISCA1P1-201ENST00000426679 387 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 HMGB1P27-201ENST00000431429 603 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 GTF2IP3-201ENST00000433887 494 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 CECR9-201ENST00000453421 199 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC113347.3-201ENST00000509113 148 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 Y_RNA.675-201ENST00000516389 149 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 RNA5SP290-201ENST00000517133 127 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC021451.1-201ENST00000523498 1129 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC006199.1-201ENST00000548728 219 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC021739.1-201ENST00000559631 174 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 MTND3P13-201ENST00000574391 343 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AC024619.4-201ENST00000580924 316 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL161798.1-201ENST00000604630 131 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL121895.2-201ENST00000619558 447 ntBASIC1.34□□□□□ -2.19
LRRC28Q86X40 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LRRC28Q86X40 AL161722.3-201ENST00000605789 2983 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 RNU6-223P-201ENST00000362830 107 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 RNU6-457P-201ENST00000363999 107 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 RNU6-224P-201ENST00000384055 107 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AL445669.1-201ENST00000426743 755 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 MTND6P13-201ENST00000443510 523 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 EEF1E1P1-201ENST00000446998 430 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC104563.1-201ENST00000476147 376 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC117532.1-201ENST00000514638 323 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 SNORA31.3-201ENST00000516029 96 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 RNU6-150P-201ENST00000516237 95 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 ROCK1P1-201ENST00000573767 549 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC105245.1-201ENST00000581934 244 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC009233.1-201ENST00000616477 371 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 AC231657.1-201ENST00000624313 397 ntBASIC1.33□□□□□ -2.2
LRRC28Q86X40 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LRRC28Q86X40 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.32□□□□□ -2.2
LRRC28Q86X40 RNU6-1167P-201ENST00000363227 94 ntBASIC1.32□□□□□ -2.2
LRRC28Q86X40 Y_RNA.245-201ENST00000364493 95 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms