Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC025465.4-201ENST00000513422 638 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 RNU4-29P-201ENST00000515943 174 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 RNU6-875P-201ENST00000516488 106 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 RNU6-914P-201ENST00000516749 109 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 SNORD60.2-201ENST00000516883 86 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 RNU6-677P-201ENST00000516914 101 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC023050.3-201ENST00000541142 333 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC010653.1-201ENST00000571108 881 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AL133393.1-201ENST00000603277 287 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 RNU6-89P-201ENST00000606519 100 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC034102.8-201ENST00000615146 484 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC039056.2-201ENST00000622261 511 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AC009033.1-201ENST00000624279 431 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 MIR622-201ENST00000638396 96 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 TPTE2P4-201ENST00000258589 1605 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
LRRTM1Q86UE6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RNU6-1167P-201ENST00000363227 94 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 Y_RNA.167-201ENST00000363735 109 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RNU6-522P-201ENST00000364497 107 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 Y_RNA.378-201ENST00000365652 113 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RNU6-1127P-201ENST00000384580 107 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AL606923.1-201ENST00000406616 190 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RN7SKP27-201ENST00000410684 333 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 TMEM167AP1-201ENST00000423409 219 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 TAAR7P-201ENST00000436141 242 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 MTCO3P18-201ENST00000440206 761 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 PIGFP3-201ENST00000441918 722 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AMD1P1-201ENST00000457220 922 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 HMGN2P26-201ENST00000463169 339 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RPL21P8-201ENST00000465083 535 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 KC877373.1-201ENST00000479066 408 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AL135752.1-201ENST00000479477 471 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC110794.1-201ENST00000505816 425 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 RAB11AP2-201ENST00000545905 639 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC078814.3-201ENST00000553036 491 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 UBL5P2-201ENST00000583788 219 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 MTND1P37-201ENST00000636562 264 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC012442.3-202ENST00000636742 206 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 AC100810.6-201ENST00000638068 285 ntBASIC2.59□□□□□ -1.99
LRRTM1Q86UE6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.59□□□□□ -2
LRRTM1Q86UE6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LRRTM1Q86UE6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LRRTM1Q86UE6 AC073544.1-201ENST00000600110 1595 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LRRTM1Q86UE6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 Y_RNA.231-201ENST00000364358 102 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 RNU4-66P-201ENST00000365199 138 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 SNORA75B-201ENST00000384053 137 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 RNU6-1077P-201ENST00000410506 102 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 RNA5SP111-201ENST00000411386 101 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 AL160275.3-201ENST00000423876 471 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.58□□□□□ -2
LRRTM1Q86UE6 AL669831.1-202ENST00000428504 417 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 AL356867.1-201ENST00000429623 299 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 AC091286.1-201ENST00000431233 461 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 MTND3P23-201ENST00000431980 347 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 GTF2IP13-201ENST00000438487 386 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 Z75741.1-201ENST00000446793 314 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 AC104058.1-201ENST00000448028 297 ntBASIC2.58□□□□□ -2
LRRTM1Q86UE6 RPS15AP27-201ENST00000449183 343 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms