Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FTH1P15-201ENST00000406984 280 ntBASIC0.48□□□□□ -2.33
CSMD3Q7Z407 RNU6-712P-201ENST00000410558 100 ntBASIC0.48□□□□□ -2.33
CSMD3Q7Z407 VN1R36P-201ENST00000414936 291 ntBASIC0.48□□□□□ -2.33
CSMD3Q7Z407 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.48□□□□□ -2.33
CSMD3Q7Z407 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.48□□□□□ -2.33
CSMD3Q7Z407 RNU6-488P-201ENST00000515918 99 ntBASIC0.48□□□□□ -2.33
CSMD3Q7Z407 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.48□□□□□ -2.33
CSMD3Q7Z407 AC099842.1-201ENST00000619919 596 ntBASIC0.48□□□□□ -2.33
CSMD3Q7Z407 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.48□□□□□ -2.33
CSMD3Q7Z407 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNU6-942P-201ENST00000363002 107 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 U6atac.2-201ENST00000408644 118 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 MIR1290-201ENST00000408735 78 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC079448.1-201ENST00000449377 373 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 ANKRD26P4-201ENST00000455755 950 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 PNPLA4P1-201ENST00000458328 305 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 MTCYBP16-201ENST00000509187 1129 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC010620.1-201ENST00000601088 1102 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC110792.4-201ENST00000609843 298 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AL118508.4-201ENST00000624142 1176 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AP000776.1-201ENST00000530032 1663 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AP002784.2-201ENST00000397300 549 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNU6-1328P-201ENST00000410938 106 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 MTCO1P53-201ENST00000441633 699 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC008494.2-201ENST00000514544 370 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 OR5AK1P-201ENST00000524837 922 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 C1DP5-201ENST00000525775 383 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AP006587.4-201ENST00000526053 529 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 CYP4A27P-201ENST00000567218 190 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC015688.2-201ENST00000584523 262 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC091812.1-201ENST00000432235 1948 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNU6-251P-201ENST00000363235 104 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNA5SP125-201ENST00000364843 120 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNU6-418P-201ENST00000384035 107 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 SNORA40.19-201ENST00000390846 128 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RNU6-220P-201ENST00000390919 107 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 RPL30P13-201ENST00000418873 348 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AL591043.1-201ENST00000432461 424 ntBASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD3Q7Z407 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 RNU4-23P-201ENST00000362839 140 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AL022718.1-201ENST00000412004 84 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC244453.4-201ENST00000419150 388 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC060773.1-201ENST00000421698 310 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC246680.2-201ENST00000422106 389 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC068135.1-201ENST00000446164 246 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC012435.1-202ENST00000568772 240 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AL137246.1-201ENST00000607072 977 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC110491.1-201ENST00000562191 2010 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 ZNF702P-202ENST00000434269 1966 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 RNU4-42P-201ENST00000364738 142 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 U3.13-201ENST00000364804 214 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 RNA5SP299-201ENST00000391203 116 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC009310.1-201ENST00000414414 451 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 RPS15AP5-201ENST00000436276 388 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 HSPE1P21-201ENST00000438283 308 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC097499.1-201ENST00000444277 208 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 MIR4653-201ENST00000585107 83 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC105224.1-201ENST00000587055 421 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC087045.1-201ENST00000605856 382 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 MIR676-201ENST00000390702 67 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 PABPC1P3-201ENST00000469174 459 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 HMGN1P10-201ENST00000474557 553 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 SNORA31.13-201ENST00000516624 135 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC067904.2-201ENST00000517322 1283 ntBASIC0.46□□□□□ -2.34
CSMD3Q7Z407 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.46□□□□□ -2.34
CSMD3Q7Z407 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
CSMD3Q7Z407 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.45□□□□□ -2.34
CSMD3Q7Z407 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms