Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC092047.1-201ENST00000424997 240 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 RPL7L1P10-201ENST00000427790 463 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC024082.2-201ENST00000434771 238 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AL161788.1-201ENST00000441805 169 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AL590365.1-201ENST00000450788 243 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AL359385.1-201ENST00000456509 365 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC111193.1-201ENST00000504097 155 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC025588.2-201ENST00000604851 466 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 ZNF702P-202ENST00000434269 1966 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC010329.5-201ENST00000623497 2174 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 U3.20-201ENST00000390909 217 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 RPL21P24-201ENST00000413752 448 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 VN1R42P-201ENST00000424651 344 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 EIF4EP4-201ENST00000424916 578 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC241584.1-201ENST00000438469 1241 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AF213884.2-201ENST00000510417 903 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 SNORA31.18-201ENST00000517043 134 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 OR5AK1P-201ENST00000524837 922 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AP003484.1-201ENST00000530974 250 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 XIAPP1-201ENST00000603162 600 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AC018638.7-201ENST00000605836 1114 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AP002791.1-201ENST00000623291 381 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 RNU6-1249P-201ENST00000363237 111 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 MIR146A-201ENST00000385201 99 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AL356131.1-201ENST00000405826 414 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AC107953.1-201ENST00000522216 297 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 CYCSP2-201ENST00000558168 301 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AC099842.1-201ENST00000619919 596 ntBASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CSPG4Q6UVK1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 PIGPP2-201ENST00000411569 458 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 RPS27P23-201ENST00000487608 251 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 RNU6-322P-201ENST00000516010 103 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 ELOCP5-201ENST00000604924 333 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 TPTE2P4-201ENST00000258589 1605 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC244453.4-201ENST00000419150 388 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC246680.2-201ENST00000422106 389 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL354941.1-201ENST00000438600 464 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC087481.2-201ENST00000565492 330 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL021997.1-201ENST00000605757 193 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC087045.1-201ENST00000605856 382 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC004852.3-201ENST00000614131 326 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AC240442.1-201ENST00000616055 283 ntBASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.44□□□□□ -2.34
CSPG4Q6UVK1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RNU6-1074P-201ENST00000383995 104 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 MIR92A1-201ENST00000385233 78 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 Y_RNA.610-201ENST00000410681 103 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AL158823.1-201ENST00000418441 478 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AL035666.1-201ENST00000446195 348 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RPL23AP6-201ENST00000446637 472 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC104997.1-201ENST00000519761 717 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC008562.1-201ENST00000521763 330 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC025857.1-201ENST00000525252 377 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC108676.2-201ENST00000605225 163 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RNU6-1243P-201ENST00000364028 107 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RPL23AP32-201ENST00000395315 459 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC092393.1-201ENST00000439625 742 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RPL39P28-201ENST00000465655 155 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC021146.2-201ENST00000504736 556 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 RNU6-1282P-201ENST00000516735 96 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 SNORD19.2-201ENST00000516978 73 ntBASIC0.43□□□□□ -2.34
CSPG4Q6UVK1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms