Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF20Q5VTR2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC079741.1-201ENST00000321498 212 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 SNORD78.2-201ENST00000391076 69 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RPS20P14-201ENST00000412545 360 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 Z82188.1-201ENST00000436709 154 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC011753.3-201ENST00000443436 406 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 TMSB4XP3-201ENST00000445144 114 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RN7SL812P-201ENST00000493791 279 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RNU6-377P-201ENST00000515965 102 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RNU6-1278P-201ENST00000516130 107 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RNU6-1012P-201ENST00000516606 109 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 RNU4-60P-201ENST00000517239 135 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC005476.1-201ENST00000554427 397 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC005046.1-201ENST00000608515 625 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 MIR6891-201ENST00000618788 93 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AL023881.1-201ENST00000621088 301 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC007785.2-201ENST00000598627 1916 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 SDAD1P2-201ENST00000441308 2028 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF20Q5VTR2 OR56B2P-202ENST00000641377 2453 ntBASIC5.28□□□□□ -1.56
RNF20Q5VTR2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC015813.6-201ENST00000624409 5808 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RNU6-858P-201ENST00000362436 107 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RNVU1-6-201ENST00000364688 164 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RNU6-290P-201ENST00000365212 101 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RNU6-926P-201ENST00000384075 107 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 MIR3065-201ENST00000390137 79 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AL033519.2-201ENST00000403958 392 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RPS16P5-201ENST00000406501 404 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RN7SKP216-201ENST00000411050 312 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 FABP5P15-201ENST00000453566 214 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RPL23AP24-201ENST00000458203 385 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 RPL21P13-201ENST00000488305 481 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC022559.1-201ENST00000520905 205 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC097372.5-201ENST00000623665 376 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC021753.1-201ENST00000635724 168 ntBASIC5.27□□□□□ -1.57
RNF20Q5VTR2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF20Q5VTR2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 RNU6-222P-201ENST00000362438 107 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 Y_RNA.245-201ENST00000364493 95 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 Y_RNA.626-201ENST00000411288 95 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AL590139.1-201ENST00000416267 400 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 RPL7AP25-201ENST00000423357 805 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC007560.1-201ENST00000426912 237 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC098831.1-201ENST00000440661 216 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC013470.1-201ENST00000453438 462 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 HSPE1P25-201ENST00000455484 251 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 snoU109.2-201ENST00000459316 135 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC139453.3-201ENST00000493276 369 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC025445.1-201ENST00000502728 300 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 MLLT10P2-201ENST00000506434 249 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 AC090617.3-201ENST00000573670 475 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 MIR6730-201ENST00000622213 67 ntBASIC5.26□□□□□ -1.57
RNF20Q5VTR2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF20Q5VTR2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF20Q5VTR2 RNU6-1301P-201ENST00000362724 104 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 RNU6-173P-201ENST00000364215 104 ntBASIC5.25□□□□□ -1.57
RNF20Q5VTR2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms