Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CYCSP39-201ENST00000565821 309 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 MIR3200-201ENST00000580767 85 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 AC110491.1-201ENST00000562191 2010 ntBASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC144BQ3MJ40 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 Y_RNA.70-201ENST00000362886 110 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 Y_RNA.142-201ENST00000363491 102 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 Y_RNA.212-201ENST00000364177 102 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-214P-201ENST00000384130 107 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 MIR483-201ENST00000385070 76 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AL122016.1-201ENST00000403365 367 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AL391417.1-201ENST00000404100 426 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 BPY2DP-201ENST00000422208 265 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC098831.1-201ENST00000440661 216 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 RPS29P31-201ENST00000446147 164 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 MTND1P11-201ENST00000456661 876 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 PPP1R2P5-201ENST00000457256 603 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC117503.1-201ENST00000472241 394 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 RNU6-256P-201ENST00000516747 97 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 RNU7-30P-201ENST00000516835 62 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 SNORD59.2-201ENST00000516873 68 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 SNORA70.24-201ENST00000517233 118 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 NUTF2P8-201ENST00000604593 363 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 MTND4LP5-201ENST00000605152 292 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 LARP7P1-201ENST00000605576 316 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 MIR7975-201ENST00000619350 68 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 U7.8-201ENST00000619968 63 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 SCARNA4-202ENST00000625402 129 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 AC073346.2-201ENST00000624724 2058 ntBASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC144BQ3MJ40 TNPO1P3-201ENST00000436471 2662 ntBASIC4.28□□□□□ -1.73
CCDC144BQ3MJ40 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AL096701.2-201ENST00000416920 238 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AL159987.2-201ENST00000432754 307 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AL359672.1-201ENST00000442302 409 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 RPS3AP46-201ENST00000448352 682 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AC091135.1-201ENST00000585943 307 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 OR1M4P-201ENST00000589199 287 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 APOOP1-201ENST00000604695 592 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AC021646.1-201ENST00000605469 484 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 XIST_intron.1-201ENST00000619444 68 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 U6.98-201ENST00000637157 84 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 AC119674.1-207ENST00000641355 633 ntBASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC144BQ3MJ40 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 SNORD81.2-201ENST00000365153 76 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 MIR218-2-201ENST00000385006 110 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 MT-TD-201ENST00000387419 68 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 RNA5SP252-201ENST00000391131 119 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 RNA5SP31-201ENST00000411144 127 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 ATP5A1P2-201ENST00000412323 255 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 VN1R36P-201ENST00000414936 291 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 NDUFB4P5-201ENST00000415445 361 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 PGBD4P6-201ENST00000421501 610 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC087884.1-201ENST00000469738 328 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC084198.1-201ENST00000477747 402 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 MTCO1P29-201ENST00000496868 288 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 RPL7P47-201ENST00000497299 556 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC114781.4-201ENST00000513707 639 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 RNA5SP208-201ENST00000516156 78 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 SNORA74D-201ENST00000516404 141 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-85P-201ENST00000605989 107 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 AC009994.1-201ENST00000606889 253 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 Y_RNA.804-201ENST00000615262 101 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms