Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 SNORD113.2-201ENST00000364166 89 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RNU6-384P-201ENST00000364900 104 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 Y_RNA.294-201ENST00000364916 102 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RNU6-1180P-201ENST00000364935 107 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RNU6-968P-201ENST00000384076 107 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 MIR32-201ENST00000384965 70 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RNA5SP213-201ENST00000391031 106 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 SNORA40.5-201ENST00000391061 128 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 MIR1271-201ENST00000408537 86 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 SNORA77-201ENST00000408716 125 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC006461.1-201ENST00000412637 326 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 SNORD33.1-201ENST00000516213 88 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RN7SKP49-201ENST00000516675 260 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC100767.1-201ENST00000528178 123 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 OR4H12P-201ENST00000556269 907 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 RN7SL435P-201ENST00000584418 282 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC069294.1-201ENST00000608397 350 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AL161629.2-201ENST00000615347 275 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC015914.2-201ENST00000618167 288 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC090971.4-201ENST00000560291 1800 ntBASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AC068647.1-201ENST00000489539 2265 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 SNORA25.7-201ENST00000364375 127 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNU6-245P-201ENST00000384020 107 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNU6-213P-201ENST00000384051 104 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AC092447.6-201ENST00000414578 210 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 OR2AH1P-201ENST00000425717 928 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AL358472.1-201ENST00000431295 329 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 MRPL48P1-201ENST00000445390 636 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 Y_RNA.651-201ENST00000459380 103 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AL121594.1-201ENST00000475906 575 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 SCARNA22-201ENST00000503991 125 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNU6-1114P-201ENST00000516022 107 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNU6-772P-201ENST00000516042 105 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNA5SP464-201ENST00000516251 108 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNU6-966P-201ENST00000516479 104 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RNA5SP392-201ENST00000516905 112 ntBASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTC1Q2NKJ3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 SRP72P2-201ENST00000344851 1979 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 Y_RNA.35-201ENST00000362601 101 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 SNORA70E-201ENST00000384492 135 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 SNORA57.1-201ENST00000391227 145 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 RNU1-139P-201ENST00000391307 165 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AP000907.1-201ENST00000428428 510 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 RPS29P9-201ENST00000440360 171 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 PTMAP3-201ENST00000447474 330 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC005042.3-201ENST00000453230 174 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 NIP7P2-201ENST00000485801 544 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AL391261.3-201ENST00000557194 520 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 MIR6716-201ENST00000613413 80 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC005296.1-201ENST00000616145 209 ntBASIC5.22□□□□□ -1.57
CTC1Q2NKJ3 AC092628.2-201ENST00000622492 339 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms