Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RN7SKP258-201ENST00000517151 304 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 SNORA70.24-201ENST00000517233 118 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 SNORA74C-1-201ENST00000580726 201 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 AC053481.4-201ENST00000583164 216 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 AC023043.3-201ENST00000593113 385 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 KLKP1-201ENST00000595979 403 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 MAPK10-338ENST00000641647 3362 ntBASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
RSPO4Q2I0M5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 RNU6-626P-201ENST00000363354 107 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 Y_RNA.534-201ENST00000384599 112 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 RNU6-376P-201ENST00000384731 106 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 CTSL3P-202ENST00000412179 788 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AL138785.1-201ENST00000425821 331 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AL133547.1-201ENST00000448546 220 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 snoU13.30-201ENST00000458951 104 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 RPS29P27-201ENST00000463711 170 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC107027.2-201ENST00000512197 115 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 RN7SKP272-201ENST00000516988 232 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 Y_RNA.712-201ENST00000517011 92 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC018442.3-201ENST00000523025 183 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 CR383656.7-201ENST00000548164 174 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC103996.1-201ENST00000555468 102 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 RN7SL435P-201ENST00000584418 282 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AL645944.1-201ENST00000603857 493 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 SNORD91B-202ENST00000608459 222 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 MIR6867-201ENST00000610636 67 ntBASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RSPO4Q2I0M5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNA5SP391-201ENST00000363456 119 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNVU1-3-201ENST00000364313 161 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNU6-20P-201ENST00000384106 107 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNU6-843P-201ENST00000384454 104 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 U3.32-201ENST00000408116 212 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AL356095.1-201ENST00000417217 199 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC063976.4-201ENST00000421971 163 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RPS20P1-201ENST00000434853 354 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AP000936.3-201ENST00000438127 255 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNU7-197P-201ENST00000458836 62 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RNU6-638P-201ENST00000516582 104 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC103783.1-201ENST00000520506 373 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC090049.2-201ENST00000550377 109 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC005046.1-201ENST00000608515 625 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC012314.7-201ENST00000619693 93 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 AC027228.2-201ENST00000567141 2154 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 SMG1P6-201ENST00000532337 2930 ntBASIC4.48□□□□□ -1.69
RSPO4Q2I0M5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 AL079305.1-201ENST00000623159 3008 ntBASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 AC006971.1-201ENST00000407916 4486 ntBASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 FTLP6-201ENST00000355274 422 ntBASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 Y_RNA.230-201ENST00000364348 109 ntBASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 RNY4P30-201ENST00000410216 95 ntBASIC4.47□□□□□ -1.69
RSPO4Q2I0M5 AL117339.3-201ENST00000418733 162 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 470 ms