Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TXNP1-201ENST00000441872 371 ntBASIC3.14□□□□□ -1.91
LTBQ06643 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 AC010401.1-201ENST00000463867 348 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 RNU6-1170P-201ENST00000515974 106 ntBASIC3.14□□□□□ -1.91
LTBQ06643 RNU6-327P-201ENST00000516270 127 ntBASIC3.14□□□□□ -1.91
LTBQ06643 RNU6-256P-201ENST00000516747 97 ntBASIC3.14□□□□□ -1.91
LTBQ06643 RNU6-566P-201ENST00000516790 107 ntBASIC3.14□□□□□ -1.91
LTBQ06643 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
LTBQ06643 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.14□□□□□ -1.91
LTBQ06643 AP004371.1-201ENST00000525240 214 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AP005639.2-201ENST00000527592 928 ntBASIC3.14□□□□□ -1.91
LTBQ06643 RANP3-201ENST00000530970 276 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 APOOP3-201ENST00000536787 586 ntBASIC3.14□□□□□ -1.91
LTBQ06643 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC093012.1-202ENST00000549403 582 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
LTBQ06643 XIAPP1-201ENST00000603162 600 ntBASIC3.14□□□□□ -1.91
LTBQ06643 DPPA3P3-201ENST00000603842 430 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AP001330.4-201ENST00000604350 154 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AP001836.1-201ENST00000604675 523 ntBASIC3.14□□□□□ -1.91
LTBQ06643 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AL162730.1-201ENST00000605734 292 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC007619.2-201ENST00000605743 379 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC012531.5-201ENST00000611375 151 ntBASIC3.14□□□□□ -1.91
LTBQ06643 AC012409.4-201ENST00000612923 249 ntBASIC3.14□□□□□ -1.91
LTBQ06643 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LTBQ06643 AC103705.1-201ENST00000619013 241 ntBASIC3.14□□□□□ -1.91
LTBQ06643 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.14□□□□□ -1.91
LTBQ06643 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LTBQ06643 AC066616.2-201ENST00000559334 1481 ntBASIC3.14□□□□□ -1.91
LTBQ06643 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LTBQ06643 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LTBQ06643 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LTBQ06643 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
LTBQ06643 MTND4P27-201ENST00000450813 1354 ntBASIC3.13□□□□□ -1.91
LTBQ06643 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 AC058791.1-201ENST00000608412 3198 ntBASIC3.13□□□□□ -1.91
LTBQ06643 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
LTBQ06643 Y_RNA.128-201ENST00000363391 112 ntBASIC3.13□□□□□ -1.91
LTBQ06643 SNORD113-7-201ENST00000363762 77 ntBASIC3.13□□□□□ -1.91
LTBQ06643 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
LTBQ06643 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBQ06643 RNU6-14P-201ENST00000384630 106 ntBASIC3.13□□□□□ -1.91
LTBQ06643 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LTBQ06643 RNA5SP219-201ENST00000390940 113 ntBASIC3.13□□□□□ -1.91
LTBQ06643 SNORA16.2-201ENST00000390991 127 ntBASIC3.13□□□□□ -1.91
LTBQ06643 SNORD70.1-201ENST00000391007 85 ntBASIC3.13□□□□□ -1.91
LTBQ06643 HSPE1P26-201ENST00000405341 275 ntBASIC3.13□□□□□ -1.91
LTBQ06643 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
LTBQ06643 MIR548P-201ENST00000408336 84 ntBASIC3.13□□□□□ -1.91
LTBQ06643 RNU2-43P-201ENST00000410306 190 ntBASIC3.13□□□□□ -1.91
LTBQ06643 BX682237.1-201ENST00000415016 335 ntBASIC3.13□□□□□ -1.91
LTBQ06643 AC092809.3-201ENST00000415453 231 ntBASIC3.13□□□□□ -1.91
LTBQ06643 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBQ06643 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBQ06643 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.13□□□□□ -1.91
LTBQ06643 FABP5P13-201ENST00000452144 328 ntBASIC3.13□□□□□ -1.91
LTBQ06643 CEACAMP4-201ENST00000457676 421 ntBASIC3.13□□□□□ -1.91
LTBQ06643 Y_RNA.639-201ENST00000458981 102 ntBASIC3.13□□□□□ -1.91
LTBQ06643 Y_RNA.635-201ENST00000459041 101 ntBASIC3.13□□□□□ -1.91
LTBQ06643 HMGB3P15-201ENST00000507326 574 ntBASIC3.13□□□□□ -1.91
LTBQ06643 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 RNA5SP454-201ENST00000517231 127 ntBASIC3.13□□□□□ -1.91
LTBQ06643 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBQ06643 AC124303.1-201ENST00000605703 360 ntBASIC3.13□□□□□ -1.91
LTBQ06643 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.13□□□□□ -1.91
LTBQ06643 AC007998.5-201ENST00000622938 237 ntBASIC3.13□□□□□ -1.91
LTBQ06643 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.13□□□□□ -1.91
LTBQ06643 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
LTBQ06643 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
LTBQ06643 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LTBQ06643 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 AL353743.1-202ENST00000431724 1695 ntBASIC3.13□□□□□ -1.91
LTBQ06643 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
LTBQ06643 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LTBQ06643 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
LTBQ06643 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LTBQ06643 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
LTBQ06643 MIR559-201ENST00000385188 96 ntBASIC3.12□□□□□ -1.91
LTBQ06643 RNY4P36-201ENST00000391116 96 ntBASIC3.12□□□□□ -1.91
LTBQ06643 EIF4E2P1-201ENST00000393781 255 ntBASIC3.12□□□□□ -1.91
LTBQ06643 RN7SKP158-201ENST00000410453 326 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC074085.1-201ENST00000413598 418 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBQ06643 Z82205.1-201ENST00000428456 297 ntBASIC3.12□□□□□ -1.91
LTBQ06643 CALM2P2-201ENST00000428512 440 ntBASIC3.12□□□□□ -1.91
LTBQ06643 CYCSP4-201ENST00000429682 331 ntBASIC3.12□□□□□ -1.91
LTBQ06643 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms