Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC018638.7-201ENST00000605836 1114 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC107952.2-201ENST00000606048 486 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC091304.6-201ENST00000619761 202 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC084768.2-201ENST00000622736 221 ntBASIC1.18□□□□□ -2.22
CCL20P78556 AC099654.9-201ENST00000637055 678 ntBASIC1.18□□□□□ -2.22
CCL20P78556 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
CCL20P78556 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCL20P78556 AL356292.1-201ENST00000283110 373 ntBASIC1.17□□□□□ -2.22
CCL20P78556 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCL20P78556 RNU6-898P-201ENST00000365627 104 ntBASIC1.17□□□□□ -2.22
CCL20P78556 Y_RNA.578-201ENST00000390903 88 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL590084.1-201ENST00000407885 387 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.17□□□□□ -2.22
CCL20P78556 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL357134.1-201ENST00000445848 426 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 MEMO1P3-201ENST00000459811 302 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.17□□□□□ -2.22
CCL20P78556 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.17□□□□□ -2.22
CCL20P78556 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.17□□□□□ -2.22
CCL20P78556 AL132657.2-201ENST00000564417 358 ntBASIC1.17□□□□□ -2.22
CCL20P78556 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.17□□□□□ -2.22
CCL20P78556 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.17□□□□□ -2.22
CCL20P78556 RPL30P11-203ENST00000598995 310 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL670379.10-201ENST00000604330 253 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL160281.1-201ENST00000605307 311 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL670379.9-201ENST00000605428 253 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AC090186.1-201ENST00000605991 572 ntBASIC1.17□□□□□ -2.22
CCL20P78556 RNU6-91P-201ENST00000607774 107 ntBASIC1.17□□□□□ -2.22
CCL20P78556 MIR8081-201ENST00000611533 95 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AP000676.3-201ENST00000623299 569 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AC112204.3-201ENST00000623822 332 ntBASIC1.17□□□□□ -2.22
CCL20P78556 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.17□□□□□ -2.22
CCL20P78556 MTND4P23-201ENST00000447723 1363 ntBASIC1.17□□□□□ -2.22
CCL20P78556 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCL20P78556 RNU6-853P-201ENST00000364306 107 ntBASIC1.16□□□□□ -2.22
CCL20P78556 MIR29C-201ENST00000385231 88 ntBASIC1.16□□□□□ -2.22
CCL20P78556 SNORA40.18-201ENST00000391200 128 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AL033519.2-201ENST00000403958 392 ntBASIC1.16□□□□□ -2.22
CCL20P78556 RN7SKP223-201ENST00000410582 62 ntBASIC1.16□□□□□ -2.22
CCL20P78556 Z98742.3-201ENST00000418637 326 ntBASIC1.16□□□□□ -2.22
CCL20P78556 MTCO3P46-201ENST00000425787 232 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AL451062.2-201ENST00000427515 271 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.16□□□□□ -2.22
CCL20P78556 SNRPEP7-201ENST00000438350 220 ntBASIC1.16□□□□□ -2.22
CCL20P78556 FCF1P6-201ENST00000456841 595 ntBASIC1.16□□□□□ -2.22
CCL20P78556 RPS29P23-201ENST00000458635 123 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC104629.1-201ENST00000494226 508 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC021146.2-201ENST00000504736 556 ntBASIC1.16□□□□□ -2.22
CCL20P78556 RNU5B-3P-201ENST00000516601 115 ntBASIC1.16□□□□□ -2.22
CCL20P78556 RNU6-586P-201ENST00000517265 104 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC005832.3-201ENST00000537929 631 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.16□□□□□ -2.22
CCL20P78556 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCL20P78556 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.16□□□□□ -2.22
CCL20P78556 AC023825.1-201ENST00000566704 1030 ntBASIC1.16□□□□□ -2.22
CCL20P78556 MIR3198-2-201ENST00000577868 80 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC016925.2-201ENST00000605108 242 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AL359314.1-201ENST00000616913 261 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC104985.3-201ENST00000623479 597 ntBASIC1.16□□□□□ -2.22
CCL20P78556 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.16□□□□□ -2.22
CCL20P78556 AC006026.1-201ENST00000444025 1803 ntBASIC1.16□□□□□ -2.22
CCL20P78556 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.15□□□□□ -2.23
CCL20P78556 MIR23B-201ENST00000384832 97 ntBASIC1.15□□□□□ -2.23
CCL20P78556 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CCL20P78556 RNU11-3P-201ENST00000391111 133 ntBASIC1.15□□□□□ -2.23
CCL20P78556 CISD1P1-201ENST00000393907 327 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.15□□□□□ -2.23
CCL20P78556 AL953862.1-201ENST00000423016 168 ntBASIC1.15□□□□□ -2.23
CCL20P78556 UBE2V1P4-201ENST00000425374 344 ntBASIC1.15□□□□□ -2.23
CCL20P78556 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL20P78556 SSXP1-201ENST00000453640 473 ntBASIC1.15□□□□□ -2.23
CCL20P78556 BTF3P15-201ENST00000455606 336 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL20P78556 RPF2P2-201ENST00000504693 896 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCL20P78556 MTCYBP43-201ENST00000513621 740 ntBASIC1.15□□□□□ -2.23
CCL20P78556 SNORA31.3-201ENST00000516029 96 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AP003355.1-201ENST00000518956 587 ntBASIC1.15□□□□□ -2.23
CCL20P78556 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL20P78556 AP005660.1-201ENST00000522972 293 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AL512310.1-201ENST00000548639 172 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL20P78556 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL20P78556 RPL21P136-201ENST00000605378 396 ntBASIC1.15□□□□□ -2.23
CCL20P78556 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC068880.4-201ENST00000623082 495 ntBASIC1.15□□□□□ -2.23
CCL20P78556 AC091948.2-201ENST00000636510 279 ntBASIC1.15□□□□□ -2.23
CCL20P78556 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCL20P78556 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCL20P78556 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCL20P78556 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCL20P78556 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
CCL20P78556 MIR597-201ENST00000384968 97 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms