Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC092125.1-201ENST00000562568 1995 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CKS1BP61024 SNORD115-48-201ENST00000364764 76 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CKS1BP61024 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
CKS1BP61024 RNU1-39P-201ENST00000383897 165 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RNU6-611P-201ENST00000384276 104 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RNU6-1005P-201ENST00000384519 107 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RNU2-48P-201ENST00000410694 191 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RNU2-68P-201ENST00000410878 191 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 PIGPP2-201ENST00000411569 458 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RPL23AP36-201ENST00000413895 458 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 MTATP6P27-201ENST00000416987 621 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 USP9YP26-201ENST00000421008 661 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 USP9YP18-201ENST00000425912 695 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 USP9YP17-201ENST00000444617 696 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RPS29P28-201ENST00000446439 141 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RNU1-123P-201ENST00000458950 160 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 SNORD97-201ENST00000459187 142 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 SNORD13-201ENST00000459299 104 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.85□□□□□ -2.27
CKS1BP61024 AC109927.2-201ENST00000506416 303 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.85□□□□□ -2.27
CKS1BP61024 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.85□□□□□ -2.27
CKS1BP61024 RNU7-40P-201ENST00000516397 64 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.85□□□□□ -2.27
CKS1BP61024 AC090821.2-201ENST00000523552 176 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.85□□□□□ -2.27
CKS1BP61024 AC090115.3-201ENST00000553218 849 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AL161670.1-201ENST00000554348 137 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC067805.1-201ENST00000559344 470 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC068338.1-201ENST00000565567 176 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AL163051.2-201ENST00000618976 735 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC002550.2-201ENST00000621246 394 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.85□□□□□ -2.27
CKS1BP61024 HAUS6P2-201ENST00000433254 2404 ntBASIC0.85□□□□□ -2.27
CKS1BP61024 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 RNU6-1164P-201ENST00000364428 107 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 OR51A5P-201ENST00000415429 942 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.84□□□□□ -2.27
CKS1BP61024 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.84□□□□□ -2.27
CKS1BP61024 AC092648.1-201ENST00000425870 423 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.84□□□□□ -2.27
CKS1BP61024 RPS15AP9-201ENST00000439856 381 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.84□□□□□ -2.27
CKS1BP61024 CECR9-201ENST00000453421 199 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 PRELID3BP1-201ENST00000457142 540 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 AL133373.1-201ENST00000497098 94 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 RNU6-548P-201ENST00000517083 115 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
CKS1BP61024 AP000763.2-201ENST00000540641 163 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.84□□□□□ -2.27
CKS1BP61024 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.84□□□□□ -2.27
CKS1BP61024 AC123912.5-201ENST00000605470 343 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
CKS1BP61024 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.83□□□□□ -2.28
CKS1BP61024 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RNU4-13P-201ENST00000364019 141 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CKS1BP61024 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS1BP61024 NCOR1P3-201ENST00000420479 303 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC139712.2-201ENST00000424302 339 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 HMGB1P27-201ENST00000431429 603 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS1BP61024 AL513124.1-201ENST00000450410 614 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS1BP61024 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS1BP61024 AP001025.1-201ENST00000486139 332 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC108729.1-201ENST00000487812 947 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS1BP61024 MTCYBP18-201ENST00000501056 747 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 MTND4P2-201ENST00000507767 1203 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS1BP61024 PTP4A1P4-201ENST00000512479 322 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC117532.1-201ENST00000514638 323 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RNU6-703P-201ENST00000516946 107 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RNA5SP404-201ENST00000517118 132 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RNU6-586P-201ENST00000517265 104 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS1BP61024 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS1BP61024 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.83□□□□□ -2.28
CKS1BP61024 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS1BP61024 MIR4513-201ENST00000581077 86 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS1BP61024 AL645939.4-201ENST00000604495 135 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 RNU6-91P-201ENST00000607774 107 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AL078604.3-201ENST00000615580 211 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC010133.1-201ENST00000615809 842 ntBASIC0.83□□□□□ -2.28
CKS1BP61024 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS1BP61024 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CKS1BP61024 MIR302D-201ENST00000362275 68 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 RNU6-658P-201ENST00000384606 106 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 MIR1267-201ENST00000408723 78 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 SRIP3-201ENST00000413200 219 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms