Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AP003392.2-201ENST00000527269 208 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 MIR4293-201ENST00000584305 78 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC010900.2-201ENST00000604508 210 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC098614.4-201ENST00000607601 462 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC096772.1-201ENST00000609146 564 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC090970.3-201ENST00000612566 866 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AL132822.1-201ENST00000617063 513 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC099842.1-201ENST00000619919 596 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC091965.5-201ENST00000624785 342 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 PCMTD1P7-201ENST00000634506 357 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.1□□□□□ -2.23
HIST1H2BDP58876 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HIST1H2BDP58876 MTND5P33-201ENST00000571250 1450 ntBASIC1.1□□□□□ -2.23
HIST1H2BDP58876 ZNF355P-201ENST00000427301 3216 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 SNORD14D-201ENST00000384390 87 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 FTH1P15-201ENST00000406984 280 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 RNU2-41P-201ENST00000410991 178 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 SNRPEP7-201ENST00000438350 220 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 BTBD7P2-201ENST00000441962 620 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC245102.2-201ENST00000448956 180 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AL109933.2-201ENST00000452651 260 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 RNU7-59P-201ENST00000459101 61 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC011825.1-201ENST00000484967 388 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 FAM92A1P2-202ENST00000504766 877 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 RNU2-53P-201ENST00000516257 147 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AP003355.1-201ENST00000518956 587 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC135279.1-201ENST00000543493 504 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 DNAJC19P3-201ENST00000594491 331 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 AC073410.2-201ENST00000603240 332 ntBASIC1.09□□□□□ -2.23
HIST1H2BDP58876 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.09□□□□□ -2.23
HIST1H2BDP58876 ZNF680P1-201ENST00000436625 1469 ntBASIC1.09□□□□□ -2.24
HIST1H2BDP58876 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.09□□□□□ -2.24
HIST1H2BDP58876 DDX43P2-201ENST00000604753 1354 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 RNU1-58P-201ENST00000362413 163 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MIR449B-201ENST00000384995 97 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 USP9YP21-201ENST00000420603 432 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC107083.1-201ENST00000439643 279 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 EEF1E1P1-201ENST00000446998 430 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 RPL39P36-201ENST00000490784 156 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC106872.3-201ENST00000495104 446 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC109927.2-201ENST00000506416 303 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MTND4P2-201ENST00000507767 1203 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 PTP4A1P4-201ENST00000512479 322 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MTCO3P27-201ENST00000514397 196 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 RNU6-1028P-201ENST00000517164 93 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AP004247.1-201ENST00000531556 1289 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 PRR13P7-201ENST00000605538 430 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL512506.1-201ENST00000613918 449 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AC006338.1-201ENST00000618453 749 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL158163.2-201ENST00000619110 700 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MIR6730-201ENST00000622213 67 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AL136313.1-201ENST00000624804 202 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 AP003485.1-201ENST00000625093 753 ntBASIC1.08□□□□□ -2.24
HIST1H2BDP58876 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
HIST1H2BDP58876 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HIST1H2BDP58876 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
HIST1H2BDP58876 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.07□□□□□ -2.24
HIST1H2BDP58876 RNU6-288P-201ENST00000363690 104 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 RNU6-1274P-201ENST00000384557 107 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 MIR186-201ENST00000384988 86 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 SNORA40.2-201ENST00000390847 128 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 Y_RNA.578-201ENST00000390903 88 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 RN7SKP284-201ENST00000411002 343 ntBASIC1.07□□□□□ -2.24
HIST1H2BDP58876 RNA5SP184-201ENST00000411071 108 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms