Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 AL137790.1-201ENST00000634283 177 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN2P57739 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
CLDN2P57739 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-82P-201ENST00000363970 107 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-270P-201ENST00000364131 105 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 Y_RNA.231-201ENST00000364358 102 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU1-140P-201ENST00000365040 165 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU4-66P-201ENST00000365199 138 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-715P-201ENST00000365204 103 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 Y_RNA.399-201ENST00000383955 105 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-38P-201ENST00000384085 107 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-434P-201ENST00000384376 107 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-393P-201ENST00000384475 107 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 SNORD15B-201ENST00000384714 146 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-1025P-201ENST00000410629 104 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 SRIP2-201ENST00000428470 166 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC025750.2-201ENST00000442609 450 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 BRK1P2-201ENST00000442875 223 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 WASF1P1-201ENST00000447560 1131 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 MTND3P16-201ENST00000452205 344 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RPL12P25-201ENST00000455592 494 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-333P-201ENST00000459117 107 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC021205.2-201ENST00000480069 347 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC096576.1-201ENST00000489014 359 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN2P57739 AC026801.1-201ENST00000497178 464 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 MTCO3P9-201ENST00000506989 781 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN2P57739 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 AC008716.1-201ENST00000511084 513 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 RNU6-358P-201ENST00000516564 75 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN2P57739 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN2P57739 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN2P57739 BNIP3P6-201ENST00000549284 499 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN2P57739 AC010525.2-201ENST00000590920 195 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN2P57739 RMST_3.1-201ENST00000611651 109 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CLDN2P57739 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.91
CLDN2P57739 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.92
CLDN2P57739 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 Y_RNA.157-201ENST00000363638 102 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 RNU4-20P-201ENST00000365601 151 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN2P57739 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN2P57739 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN2P57739 FGF7P8-201ENST00000402994 292 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 RPL26P27-201ENST00000414397 437 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
CLDN2P57739 HMGN2P30-201ENST00000423237 256 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AL669831.1-202ENST00000428504 417 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 ERLEC1P1-201ENST00000433806 578 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN2P57739 GTF2IP13-201ENST00000438487 386 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 RPS15AP27-201ENST00000449183 343 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 HMGB3P8-201ENST00000449709 577 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN2P57739 RPL21P99-201ENST00000480369 423 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 AC079140.5-201ENST00000507882 310 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN2P57739 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN2P57739 MTCO3P23-201ENST00000561363 289 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 MTCO3P24-201ENST00000572729 782 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AC060780.3-201ENST00000589464 80 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 U6.42-201ENST00000618440 107 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 U2.21-201ENST00000637295 81 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 MTND4P35-201ENST00000604257 1375 ntBASIC3.08□□□□□ -1.92
CLDN2P57739 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN2P57739 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN2P57739 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN2P57739 MIR412-201ENST00000362142 91 ntBASIC3.07□□□□□ -1.92
CLDN2P57739 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
CLDN2P57739 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
CLDN2P57739 RNU6-45P-201ENST00000384471 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms