Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC109486.1-201ENST00000486833 374 ntBASIC2.15□□□□□ -2.07
CDH4P55283 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDH4P55283 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH4P55283 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH4P55283 RPS3AP4-201ENST00000555161 764 ntBASIC2.15□□□□□ -2.07
CDH4P55283 AL358072.1-201ENST00000604156 575 ntBASIC2.15□□□□□ -2.07
CDH4P55283 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH4P55283 AL356266.1-201ENST00000623311 483 ntBASIC2.15□□□□□ -2.07
CDH4P55283 AL512643.1-201ENST00000635735 524 ntBASIC2.15□□□□□ -2.07
CDH4P55283 Z99571.1-201ENST00000636677 394 ntBASIC2.15□□□□□ -2.07
CDH4P55283 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH4P55283 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDH4P55283 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
CDH4P55283 Z75746.1-201ENST00000440243 2080 ntBASIC2.14□□□□□ -2.07
CDH4P55283 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH4P55283 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH4P55283 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CDH4P55283 RNY3P13-201ENST00000365542 102 ntBASIC2.14□□□□□ -2.07
CDH4P55283 RNU6-817P-201ENST00000391083 104 ntBASIC2.14□□□□□ -2.07
CDH4P55283 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
CDH4P55283 RN7SKP158-201ENST00000410453 326 ntBASIC2.14□□□□□ -2.07
CDH4P55283 RPS12P24-201ENST00000412619 387 ntBASIC2.14□□□□□ -2.07
CDH4P55283 NPM1P11-201ENST00000417106 855 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH4P55283 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH4P55283 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH4P55283 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH4P55283 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 SNORD11.1-201ENST00000459482 85 ntBASIC2.14□□□□□ -2.07
CDH4P55283 RPL36AP48-201ENST00000485521 314 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.14□□□□□ -2.07
CDH4P55283 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH4P55283 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 MRPS36P3-201ENST00000519284 130 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 MIR3146-201ENST00000580367 79 ntBASIC2.14□□□□□ -2.07
CDH4P55283 MIR4307-201ENST00000582802 84 ntBASIC2.14□□□□□ -2.07
CDH4P55283 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.6-201ENST00000603753 252 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.11-201ENST00000604059 253 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AC008162.1-201ENST00000604718 254 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.1-201ENST00000604752 252 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.5-201ENST00000605253 252 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.12-201ENST00000605291 253 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.8-201ENST00000605353 252 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL670379.7-201ENST00000605823 252 ntBASIC2.14□□□□□ -2.07
CDH4P55283 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH4P55283 AL031601.2-202ENST00000622650 282 ntBASIC2.14□□□□□ -2.07
CDH4P55283 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 Y_RNA.46-201ENST00000362695 102 ntBASIC2.13□□□□□ -2.07
CDH4P55283 RNU6-748P-201ENST00000384648 107 ntBASIC2.13□□□□□ -2.07
CDH4P55283 FCF1P10-201ENST00000407590 479 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH4P55283 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC093106.2-201ENST00000428212 385 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH4P55283 BRK1P2-201ENST00000442875 223 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC124916.1-201ENST00000444020 547 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL591719.1-201ENST00000444669 744 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 RPL7P12-201ENST00000446719 750 ntBASIC2.13□□□□□ -2.07
CDH4P55283 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH4P55283 MTCO1P42-201ENST00000457379 726 ntBASIC2.13□□□□□ -2.07
CDH4P55283 MTND1P3-201ENST00000484956 952 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC011005.2-201ENST00000487324 359 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH4P55283 AC116655.1-201ENST00000508324 901 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AF213884.2-201ENST00000510417 903 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 RNU7-193P-201ENST00000516723 65 ntBASIC2.13□□□□□ -2.07
CDH4P55283 RNU6-572P-201ENST00000516724 80 ntBASIC2.13□□□□□ -2.07
CDH4P55283 IGKV3-31-201ENST00000523109 329 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.13□□□□□ -2.07
CDH4P55283 AL138976.2-201ENST00000563989 694 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH4P55283 AL031281.1-201ENST00000604049 488 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC105148.1-201ENST00000604961 409 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL138963.2-201ENST00000605137 226 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC013244.3-201ENST00000605614 388 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL391813.2-201ENST00000609113 322 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AL161423.1-201ENST00000613700 262 ntBASIC2.13□□□□□ -2.07
CDH4P55283 AC024581.2-201ENST00000619986 252 ntBASIC2.13□□□□□ -2.07
CDH4P55283 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH4P55283 HSPA8P4-201ENST00000511877 1920 ntBASIC2.13□□□□□ -2.07
CDH4P55283 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDH4P55283 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CDH4P55283 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH4P55283 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
CDH4P55283 AL391994.1-201ENST00000254724 282 ntBASIC2.12□□□□□ -2.07
CDH4P55283 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDH4P55283 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms