Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC009570.1-201ENST00000609599 745 ntBASIC4.16□□□□□ -1.74
EPHB4P54760 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.16□□□□□ -1.74
EPHB4P54760 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.16□□□□□ -1.74
EPHB4P54760 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB4P54760 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB4P54760 AC103710.2-202ENST00000641454 2853 ntBASIC4.16□□□□□ -1.74
EPHB4P54760 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB4P54760 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB4P54760 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
EPHB4P54760 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB4P54760 AC006504.1-201ENST00000562493 3666 ntBASIC4.15□□□□□ -1.74
EPHB4P54760 AL133383.2-201ENST00000622958 2336 ntBASIC4.15□□□□□ -1.74
EPHB4P54760 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB4P54760 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
EPHB4P54760 DEFB109C-201ENST00000382575 264 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 DEFB109B-201ENST00000382656 264 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 RNU6-946P-201ENST00000383878 107 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 RNU6-306P-201ENST00000384617 107 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AL109755.1-201ENST00000401791 649 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 RPL21P24-201ENST00000413752 448 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB4P54760 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
EPHB4P54760 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
EPHB4P54760 RPS15AP40-201ENST00000419621 391 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC005300.1-201ENST00000428401 373 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC005326.1-201ENST00000429197 123 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.15□□□□□ -1.75
EPHB4P54760 HIGD1AP11-201ENST00000438361 280 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 RPS24P13-201ENST00000442520 397 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHB4P54760 SNORA14.1-201ENST00000516113 141 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 SCARNA16.2-201ENST00000516520 172 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 RNU6-1069P-201ENST00000516612 133 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB4P54760 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.15□□□□□ -1.75
EPHB4P54760 GNAI2P1-201ENST00000541815 315 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHB4P54760 AC092447.9-201ENST00000603395 144 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 MIR8057-201ENST00000620957 69 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 MIR4496-201ENST00000635896 61 ntBASIC4.15□□□□□ -1.75
EPHB4P54760 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
EPHB4P54760 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB4P54760 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
EPHB4P54760 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHB4P54760 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHB4P54760 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHB4P54760 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
EPHB4P54760 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
EPHB4P54760 Y_RNA.257-201ENST00000364596 102 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 SMIM11P1-201ENST00000369586 178 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RNU6-128P-201ENST00000383976 107 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RNU6-637P-201ENST00000384050 107 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 Y_RNA.500-201ENST00000384466 111 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RNU6-393P-201ENST00000384475 107 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 HLFP1-201ENST00000402375 499 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RNA5SP111-201ENST00000411386 101 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 PCNPP5-201ENST00000452246 481 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 HMGB3P30-201ENST00000457863 606 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RNU7-167P-201ENST00000459160 62 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 AC117503.1-201ENST00000472241 394 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 UBE2DNL-203ENST00000474922 222 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 AC087385.1-201ENST00000475062 312 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 RPS27AP1-201ENST00000475545 471 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 MTCO3P44-201ENST00000510977 541 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 Y_RNA.668-201ENST00000516233 93 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.14□□□□□ -1.75
EPHB4P54760 HMGN1P28-201ENST00000521340 364 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHB4P54760 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHB4P54760 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
EPHB4P54760 YPEL5P2-201ENST00000605553 359 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.14□□□□□ -1.75
EPHB4P54760 AC062037.2-201ENST00000610137 73 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 U7.8-201ENST00000619968 63 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.14□□□□□ -1.75
EPHB4P54760 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
EPHB4P54760 AC091812.1-201ENST00000432235 1948 ntBASIC4.14□□□□□ -1.75
EPHB4P54760 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHB4P54760 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EPHB4P54760 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
EPHB4P54760 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
EPHB4P54760 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EPHB4P54760 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-1284P-201ENST00000363701 100 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU1-33P-201ENST00000364249 162 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-356P-201ENST00000384140 107 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 SNORD51-201ENST00000384320 80 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 Y_RNA.485-201ENST00000384395 102 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-1026P-201ENST00000384465 108 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-95P-201ENST00000384697 107 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-1109P-201ENST00000391187 107 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 HSPE1P8-201ENST00000406997 288 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RNU6-101P-201ENST00000410323 104 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RPL7AP73-201ENST00000413490 353 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 USMG5P1-201ENST00000425964 177 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RPS6P12-201ENST00000432491 726 ntBASIC4.13□□□□□ -1.75
EPHB4P54760 RPL23AP50-201ENST00000434149 455 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms