Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
COPAP53621 RNU6-1314P-201ENST00000517139 104 ntBASIC3.56□□□□□ -1.84
COPAP53621 RNU6-1315P-201ENST00000517187 99 ntBASIC3.56□□□□□ -1.84
COPAP53621 BTF3P12-201ENST00000519620 469 ntBASIC3.56□□□□□ -1.84
COPAP53621 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COPAP53621 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.56□□□□□ -1.84
COPAP53621 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.56□□□□□ -1.84
COPAP53621 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.56□□□□□ -1.84
COPAP53621 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
COPAP53621 SNORD39.4-201ENST00000620099 78 ntBASIC3.56□□□□□ -1.84
COPAP53621 AL136221.1-201ENST00000621449 509 ntBASIC3.56□□□□□ -1.84
COPAP53621 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
COPAP53621 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.56□□□□□ -1.84
COPAP53621 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.56□□□□□ -1.84
COPAP53621 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COPAP53621 MFSD8-233ENST00000641482 4860 ntBASIC3.56□□□□□ -1.84
COPAP53621 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
COPAP53621 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COPAP53621 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COPAP53621 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.55□□□□□ -1.84
COPAP53621 RNU6-845P-201ENST00000362578 103 ntBASIC3.55□□□□□ -1.84
COPAP53621 Y_RNA.373-201ENST00000365600 103 ntBASIC3.55□□□□□ -1.84
COPAP53621 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COPAP53621 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COPAP53621 RNU2-68P-201ENST00000410878 191 ntBASIC3.55□□□□□ -1.84
COPAP53621 RNA5SP120-201ENST00000410900 112 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.55□□□□□ -1.84
COPAP53621 AC017079.2-201ENST00000416102 485 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.55□□□□□ -1.84
COPAP53621 SNRPEP9-201ENST00000436794 238 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC093019.1-201ENST00000443135 252 ntBASIC3.55□□□□□ -1.84
COPAP53621 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.55□□□□□ -1.84
COPAP53621 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.55□□□□□ -1.84
COPAP53621 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.55□□□□□ -1.84
COPAP53621 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.55□□□□□ -1.84
COPAP53621 MTND1P11-201ENST00000456661 876 ntBASIC3.55□□□□□ -1.84
COPAP53621 Y_RNA.654-201ENST00000497848 106 ntBASIC3.55□□□□□ -1.84
COPAP53621 CCDC34P1-201ENST00000507441 517 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC006445.2-201ENST00000510061 472 ntBASIC3.55□□□□□ -1.84
COPAP53621 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.55□□□□□ -1.84
COPAP53621 RNU6-1038P-201ENST00000516516 104 ntBASIC3.55□□□□□ -1.84
COPAP53621 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.55□□□□□ -1.84
COPAP53621 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.55□□□□□ -1.84
COPAP53621 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.55□□□□□ -1.84
COPAP53621 MIR1273C-201ENST00000578669 77 ntBASIC3.55□□□□□ -1.84
COPAP53621 MIR5692A1-201ENST00000580523 69 ntBASIC3.55□□□□□ -1.84
COPAP53621 MIR548AC-201ENST00000585049 88 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC092807.2-201ENST00000609367 243 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC009248.2-201ENST00000619826 254 ntBASIC3.55□□□□□ -1.84
COPAP53621 AC104985.2-201ENST00000620598 500 ntBASIC3.55□□□□□ -1.84
COPAP53621 FAM35CP-201ENST00000554755 2470 ntBASIC3.55□□□□□ -1.84
COPAP53621 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COPAP53621 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COPAP53621 FRG1CP-201ENST00000358464 769 ntBASIC3.54□□□□□ -1.84
COPAP53621 Y_RNA.33-201ENST00000362591 102 ntBASIC3.54□□□□□ -1.84
COPAP53621 RNU6-82P-201ENST00000363970 107 ntBASIC3.54□□□□□ -1.84
COPAP53621 RNA5SP139-201ENST00000364340 117 ntBASIC3.54□□□□□ -1.84
COPAP53621 RNU6-393P-201ENST00000384475 107 ntBASIC3.54□□□□□ -1.84
COPAP53621 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COPAP53621 RPL21P90-201ENST00000415692 466 ntBASIC3.54□□□□□ -1.84
COPAP53621 RPS15AP6-201ENST00000420703 385 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.54□□□□□ -1.84
COPAP53621 BX679664.1-201ENST00000434429 253 ntBASIC3.54□□□□□ -1.84
COPAP53621 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.54□□□□□ -1.84
COPAP53621 RPS15AP27-201ENST00000449183 343 ntBASIC3.54□□□□□ -1.84
COPAP53621 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.54□□□□□ -1.84
COPAP53621 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.54□□□□□ -1.84
COPAP53621 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
COPAP53621 RNU6-1208P-201ENST00000459588 107 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.54□□□□□ -1.84
COPAP53621 AC104136.1-201ENST00000512969 394 ntBASIC3.54□□□□□ -1.84
COPAP53621 Y_RNA.665-201ENST00000516177 98 ntBASIC3.54□□□□□ -1.84
COPAP53621 RPL7P20-201ENST00000520308 745 ntBASIC3.54□□□□□ -1.84
COPAP53621 AP003122.3-201ENST00000526316 255 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 AC084851.1-201ENST00000529105 249 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC011611.1-201ENST00000552179 197 ntBASIC3.54□□□□□ -1.84
COPAP53621 PSMA3P-201ENST00000555485 635 ntBASIC3.54□□□□□ -1.84
COPAP53621 AL157871.3-201ENST00000557231 293 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.54□□□□□ -1.84
COPAP53621 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 U2.17-201ENST00000611454 95 ntBASIC3.54□□□□□ -1.84
COPAP53621 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 AL359693.1-201ENST00000614959 2407 ntBASIC3.54□□□□□ -1.84
COPAP53621 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COPAP53621 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.54□□□□□ -1.84
COPAP53621 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
COPAP53621 MTND4P35-201ENST00000604257 1375 ntBASIC3.53□□□□□ -1.84
COPAP53621 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
COPAP53621 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.53□□□□□ -1.84
COPAP53621 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
COPAP53621 SRP72P2-201ENST00000344851 1979 ntBASIC3.53□□□□□ -1.84
COPAP53621 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
COPAP53621 FTLP6-201ENST00000355274 422 ntBASIC3.53□□□□□ -1.84
COPAP53621 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
COPAP53621 RNU6-797P-201ENST00000363101 109 ntBASIC3.53□□□□□ -1.84
COPAP53621 Y_RNA.378-201ENST00000365652 113 ntBASIC3.53□□□□□ -1.84
COPAP53621 RNU6-395P-201ENST00000365662 106 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms