Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.53□□□□□ -1.84
COPB1P53618 RNU6-677P-201ENST00000516914 101 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC090136.1-201ENST00000520009 240 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
COPB1P53618 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.53□□□□□ -1.84
COPB1P53618 AL355836.1-201ENST00000555951 870 ntBASIC3.53□□□□□ -1.84
COPB1P53618 MTCO3P23-201ENST00000561363 289 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL355375.2-201ENST00000574825 175 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.53□□□□□ -1.84
COPB1P53618 MIR4276-201ENST00000584832 70 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC005498.1-201ENST00000592125 465 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL138889.2-201ENST00000603883 242 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL022345.1-201ENST00000607292 135 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL050343.2-201ENST00000607338 280 ntBASIC3.53□□□□□ -1.84
COPB1P53618 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 AL591516.1-201ENST00000611326 274 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL359547.2-201ENST00000615810 418 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC103705.1-201ENST00000619013 241 ntBASIC3.53□□□□□ -1.84
COPB1P53618 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
COPB1P53618 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
COPB1P53618 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COPB1P53618 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COPB1P53618 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COPB1P53618 DEFB108F-201ENST00000344638 222 ntBASIC3.52□□□□□ -1.85
COPB1P53618 RNU6-288P-201ENST00000363690 104 ntBASIC3.52□□□□□ -1.85
COPB1P53618 RNU6-173P-201ENST00000364215 104 ntBASIC3.52□□□□□ -1.85
COPB1P53618 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COPB1P53618 Y_RNA.399-201ENST00000383955 105 ntBASIC3.52□□□□□ -1.85
COPB1P53618 RNU6-1011P-201ENST00000384668 107 ntBASIC3.52□□□□□ -1.85
COPB1P53618 CISD1P1-201ENST00000393907 327 ntBASIC3.52□□□□□ -1.85
COPB1P53618 RPL21P3-201ENST00000395517 478 ntBASIC3.52□□□□□ -1.85
COPB1P53618 RPS12P24-201ENST00000412619 387 ntBASIC3.52□□□□□ -1.85
COPB1P53618 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.52□□□□□ -1.85
COPB1P53618 AL591704.1-201ENST00000432574 275 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC233279.1-201ENST00000455300 423 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC146507.2-201ENST00000460608 476 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.52□□□□□ -1.85
COPB1P53618 RNU6-927P-201ENST00000516199 100 ntBASIC3.52□□□□□ -1.85
COPB1P53618 IGHV3-76-201ENST00000522465 295 ntBASIC3.52□□□□□ -1.85
COPB1P53618 CBX3P7-201ENST00000532876 502 ntBASIC3.52□□□□□ -1.85
COPB1P53618 SNRPGP16-201ENST00000533275 226 ntBASIC3.52□□□□□ -1.85
COPB1P53618 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.52□□□□□ -1.85
COPB1P53618 MED28P6-201ENST00000558776 231 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.52□□□□□ -1.85
COPB1P53618 MIR3942-201ENST00000585264 109 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AL158032.1-201ENST00000605401 106 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC022893.3-201ENST00000607665 437 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AC104237.2-201ENST00000612456 443 ntBASIC3.52□□□□□ -1.85
COPB1P53618 DUSP12P1-201ENST00000612874 516 ntBASIC3.52□□□□□ -1.85
COPB1P53618 AL355810.1-201ENST00000614629 552 ntBASIC3.52□□□□□ -1.85
COPB1P53618 MIR1302-1-201ENST00000637932 143 ntBASIC3.52□□□□□ -1.85
COPB1P53618 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.52□□□□□ -1.85
COPB1P53618 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COPB1P53618 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 RNU5A-1-201ENST00000362698 116 ntBASIC3.51□□□□□ -1.85
COPB1P53618 Y_RNA.58-201ENST00000362807 102 ntBASIC3.51□□□□□ -1.85
COPB1P53618 Y_RNA.154-201ENST00000363624 102 ntBASIC3.51□□□□□ -1.85
COPB1P53618 RNY3P1-201ENST00000365085 102 ntBASIC3.51□□□□□ -1.85
COPB1P53618 RNY3-201ENST00000365484 102 ntBASIC3.51□□□□□ -1.85
COPB1P53618 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 XGY1-201ENST00000381172 446 ntBASIC3.51□□□□□ -1.85
COPB1P53618 Y_RNA.490-201ENST00000384413 102 ntBASIC3.51□□□□□ -1.85
COPB1P53618 MIR514A1-201ENST00000385133 98 ntBASIC3.51□□□□□ -1.85
COPB1P53618 SNORD70.1-201ENST00000391007 85 ntBASIC3.51□□□□□ -1.85
COPB1P53618 Z92545.1-201ENST00000411782 234 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AL513331.1-201ENST00000411908 397 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.51□□□□□ -1.85
COPB1P53618 BX682237.1-201ENST00000415016 335 ntBASIC3.51□□□□□ -1.85
COPB1P53618 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 PPP1R2P5-201ENST00000457256 603 ntBASIC3.51□□□□□ -1.85
COPB1P53618 RNU6-953P-201ENST00000459154 107 ntBASIC3.51□□□□□ -1.85
COPB1P53618 RN7SL601P-201ENST00000471221 293 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 AC007458.1-201ENST00000542812 373 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC090115.3-201ENST00000553218 849 ntBASIC3.51□□□□□ -1.85
COPB1P53618 ANP32BP3-201ENST00000559213 706 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC005668.1-201ENST00000571142 476 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
COPB1P53618 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 AC092747.3-201ENST00000603769 301 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC113139.1-201ENST00000605049 239 ntBASIC3.51□□□□□ -1.85
COPB1P53618 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.51□□□□□ -1.85
COPB1P53618 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.51□□□□□ -1.85
COPB1P53618 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC034102.8-201ENST00000615146 484 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC007742.2-201ENST00000618226 398 ntBASIC3.51□□□□□ -1.85
COPB1P53618 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AC048347.1-201ENST00000624621 427 ntBASIC3.51□□□□□ -1.85
COPB1P53618 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.51□□□□□ -1.85
COPB1P53618 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.51□□□□□ -1.85
COPB1P53618 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COPB1P53618 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms