Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 RNA5SP291-201ENST00000517222 105 ntBASIC3.34□□□□□ -1.87
CTCFP49711 OR5B19P-201ENST00000531766 928 ntBASIC3.34□□□□□ -1.87
CTCFP49711 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
CTCFP49711 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.34□□□□□ -1.87
CTCFP49711 AC010546.1-201ENST00000569391 485 ntBASIC3.34□□□□□ -1.87
CTCFP49711 AC024619.4-201ENST00000580924 316 ntBASIC3.34□□□□□ -1.87
CTCFP49711 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.34□□□□□ -1.87
CTCFP49711 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.34□□□□□ -1.87
CTCFP49711 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTCFP49711 CTSLP2-204ENST00000629029 392 ntBASIC3.34□□□□□ -1.87
CTCFP49711 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.34□□□□□ -1.87
CTCFP49711 AC084035.1-201ENST00000634543 607 ntBASIC3.34□□□□□ -1.87
CTCFP49711 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
CTCFP49711 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CTCFP49711 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.88
CTCFP49711 MTND5P19-201ENST00000424872 1794 ntBASIC3.33□□□□□ -1.88
CTCFP49711 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTCFP49711 RNU6-1097P-201ENST00000363586 107 ntBASIC3.33□□□□□ -1.88
CTCFP49711 RN7SKP226-201ENST00000364912 300 ntBASIC3.33□□□□□ -1.88
CTCFP49711 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.33□□□□□ -1.88
CTCFP49711 RNU6-217P-201ENST00000384164 104 ntBASIC3.33□□□□□ -1.88
CTCFP49711 Y_RNA.517-201ENST00000384551 106 ntBASIC3.33□□□□□ -1.88
CTCFP49711 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.33□□□□□ -1.88
CTCFP49711 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC114491.1-201ENST00000416095 246 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC104651.1-201ENST00000427559 735 ntBASIC3.33□□□□□ -1.88
CTCFP49711 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CTCFP49711 MTATP6P16-201ENST00000434543 526 ntBASIC3.33□□□□□ -1.88
CTCFP49711 RPL36AP6-201ENST00000435770 321 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC079781.2-201ENST00000446424 169 ntBASIC3.33□□□□□ -1.88
CTCFP49711 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
CTCFP49711 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.33□□□□□ -1.88
CTCFP49711 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CTCFP49711 RNU6-928P-201ENST00000516876 104 ntBASIC3.33□□□□□ -1.88
CTCFP49711 AC022880.1-201ENST00000534017 973 ntBASIC3.33□□□□□ -1.88
CTCFP49711 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.33□□□□□ -1.88
CTCFP49711 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.33□□□□□ -1.88
CTCFP49711 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.33□□□□□ -1.88
CTCFP49711 AC098848.2-201ENST00000588023 330 ntBASIC3.33□□□□□ -1.88
CTCFP49711 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.33□□□□□ -1.88
CTCFP49711 MTND5P42-201ENST00000637720 498 ntBASIC3.33□□□□□ -1.88
CTCFP49711 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTCFP49711 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTCFP49711 AP003122.5-201ENST00000527668 3766 ntBASIC3.33□□□□□ -1.88
CTCFP49711 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
CTCFP49711 UBE2L2-201ENST00000254302 429 ntBASIC3.32□□□□□ -1.88
CTCFP49711 Y_RNA.41-201ENST00000362646 102 ntBASIC3.32□□□□□ -1.88
CTCFP49711 SNORA51.4-201ENST00000364993 124 ntBASIC3.32□□□□□ -1.88
CTCFP49711 Y_RNA.367-201ENST00000365544 101 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RNU6-641P-201ENST00000384006 107 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RNU6-1103P-201ENST00000384150 107 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RNU6-1035P-201ENST00000384477 107 ntBASIC3.32□□□□□ -1.88
CTCFP49711 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.32□□□□□ -1.88
CTCFP49711 GSTA9P-201ENST00000406231 611 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RNU4-26P-201ENST00000410270 107 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RNU4-53P-201ENST00000410828 140 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RPL23AP36-201ENST00000413895 458 ntBASIC3.32□□□□□ -1.88
CTCFP49711 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.32□□□□□ -1.88
CTCFP49711 HMGB1P27-201ENST00000431429 603 ntBASIC3.32□□□□□ -1.88
CTCFP49711 RPS15AP9-201ENST00000439856 381 ntBASIC3.32□□□□□ -1.88
CTCFP49711 AL353705.4-201ENST00000449661 238 ntBASIC3.32□□□□□ -1.88
CTCFP49711 AC010099.1-201ENST00000455434 375 ntBASIC3.32□□□□□ -1.88
CTCFP49711 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 AC082651.2-201ENST00000496833 166 ntBASIC3.32□□□□□ -1.88
CTCFP49711 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.32□□□□□ -1.88
CTCFP49711 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTCFP49711 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 NUTF2P8-201ENST00000604593 363 ntBASIC3.32□□□□□ -1.88
CTCFP49711 AC015540.1-201ENST00000615828 501 ntBASIC3.32□□□□□ -1.88
CTCFP49711 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
CTCFP49711 AC138649.3-201ENST00000622154 254 ntBASIC3.32□□□□□ -1.88
CTCFP49711 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CTCFP49711 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTCFP49711 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTCFP49711 Y_RNA.159-201ENST00000363674 87 ntBASIC3.31□□□□□ -1.88
CTCFP49711 RNU6-288P-201ENST00000363690 104 ntBASIC3.31□□□□□ -1.88
CTCFP49711 RNU6-512P-201ENST00000364438 103 ntBASIC3.31□□□□□ -1.88
CTCFP49711 SNORA9.2-201ENST00000365361 133 ntBASIC3.31□□□□□ -1.88
CTCFP49711 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTCFP49711 SNORA24.1-201ENST00000384401 135 ntBASIC3.31□□□□□ -1.88
CTCFP49711 RNU6-456P-201ENST00000384493 107 ntBASIC3.31□□□□□ -1.88
CTCFP49711 MIR1-2-201ENST00000384961 85 ntBASIC3.31□□□□□ -1.88
CTCFP49711 RNA5SP344-201ENST00000411081 104 ntBASIC3.31□□□□□ -1.88
CTCFP49711 AC092809.3-201ENST00000415453 231 ntBASIC3.31□□□□□ -1.88
CTCFP49711 ISCA1P1-201ENST00000426679 387 ntBASIC3.31□□□□□ -1.88
CTCFP49711 ELOCP14-201ENST00000428070 331 ntBASIC3.31□□□□□ -1.88
CTCFP49711 ELOCP7-201ENST00000439968 331 ntBASIC3.31□□□□□ -1.88
CTCFP49711 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTCFP49711 FABP5P15-201ENST00000453566 214 ntBASIC3.31□□□□□ -1.88
CTCFP49711 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.31□□□□□ -1.88
CTCFP49711 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.31□□□□□ -1.88
CTCFP49711 HMGB1P29-201ENST00000505659 499 ntBASIC3.31□□□□□ -1.88
CTCFP49711 AC117522.1-201ENST00000509821 380 ntBASIC3.31□□□□□ -1.88
CTCFP49711 SNORD27.1-201ENST00000516319 72 ntBASIC3.31□□□□□ -1.88
CTCFP49711 RNA5SP290-201ENST00000517133 127 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms