Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 AC092001.1-201ENST00000453012 261 ntBASIC2.05□□□□□ -2.08
RFX3P48380 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 MIR892C-201ENST00000516410 77 ntBASIC2.05□□□□□ -2.08
RFX3P48380 RNU6-1183P-201ENST00000517054 60 ntBASIC2.05□□□□□ -2.08
RFX3P48380 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX3P48380 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX3P48380 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX3P48380 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.05□□□□□ -2.08
RFX3P48380 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 ELOCP32-201ENST00000548625 324 ntBASIC2.05□□□□□ -2.08
RFX3P48380 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX3P48380 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
RFX3P48380 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
RFX3P48380 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
RFX3P48380 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX3P48380 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX3P48380 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFX3P48380 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RFX3P48380 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
RFX3P48380 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RFX3P48380 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
RFX3P48380 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 Y_RNA.97-201ENST00000363094 102 ntBASIC2.04□□□□□ -2.08
RFX3P48380 RNU6-1214P-201ENST00000363650 109 ntBASIC2.04□□□□□ -2.08
RFX3P48380 Z98749.2-208ENST00000381646 500 ntBASIC2.04□□□□□ -2.08
RFX3P48380 RNU6-701P-201ENST00000384059 107 ntBASIC2.04□□□□□ -2.08
RFX3P48380 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
RFX3P48380 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 RPS20P2-201ENST00000402520 389 ntBASIC2.04□□□□□ -2.08
RFX3P48380 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
RFX3P48380 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 OR51A5P-201ENST00000415429 942 ntBASIC2.04□□□□□ -2.08
RFX3P48380 NPM1P11-201ENST00000417106 855 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX3P48380 AC093106.2-201ENST00000428212 385 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AL121890.1-201ENST00000435457 205 ntBASIC2.04□□□□□ -2.08
RFX3P48380 MTCYBP39-201ENST00000437562 491 ntBASIC2.04□□□□□ -2.08
RFX3P48380 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX3P48380 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX3P48380 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.04□□□□□ -2.08
RFX3P48380 RNU6-953P-201ENST00000459154 107 ntBASIC2.04□□□□□ -2.08
RFX3P48380 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RFX3P48380 RPL39P36-201ENST00000490784 156 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX3P48380 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.04□□□□□ -2.08
RFX3P48380 SNORA25.11-201ENST00000515935 105 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AP001372.4-201ENST00000524889 472 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX3P48380 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX3P48380 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX3P48380 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.04□□□□□ -2.08
RFX3P48380 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.04□□□□□ -2.08
RFX3P48380 AC008751.2-201ENST00000597885 980 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AC234772.3-201ENST00000602277 528 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AC121334.2-201ENST00000605387 271 ntBASIC2.04□□□□□ -2.08
RFX3P48380 AL121917.1-203ENST00000605534 577 ntBASIC2.04□□□□□ -2.08
RFX3P48380 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX3P48380 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.03□□□□□ -2.08
RFX3P48380 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX3P48380 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFX3P48380 RNU6-486P-201ENST00000363116 107 ntBASIC2.03□□□□□ -2.08
RFX3P48380 RNY3P13-201ENST00000365542 102 ntBASIC2.03□□□□□ -2.08
RFX3P48380 SNORA51.11-201ENST00000384442 131 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
RFX3P48380 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
RFX3P48380 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
RFX3P48380 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
RFX3P48380 PTGES3P4-201ENST00000426243 356 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
RFX3P48380 NEFMP1-201ENST00000443423 1006 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX3P48380 AL513124.1-201ENST00000450410 614 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX3P48380 AC090515.1-201ENST00000465295 476 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC008526.1-201ENST00000509149 338 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AF213884.2-201ENST00000510417 903 ntBASIC2.03□□□□□ -2.08
RFX3P48380 SNORA3.4-201ENST00000515969 96 ntBASIC2.03□□□□□ -2.08
RFX3P48380 RNU6-415P-201ENST00000516252 97 ntBASIC2.03□□□□□ -2.08
RFX3P48380 RN7SKP265-201ENST00000516448 223 ntBASIC2.03□□□□□ -2.08
RFX3P48380 RNU6-143P-201ENST00000516942 93 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX3P48380 PCMTD1P2-201ENST00000565017 355 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC022022.2-201ENST00000602989 360 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC104763.2-201ENST00000604179 382 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.03□□□□□ -2.08
RFX3P48380 AC087241.4-201ENST00000612441 480 ntBASIC2.03□□□□□ -2.08
RFX3P48380 AC009233.1-201ENST00000616477 371 ntBASIC2.03□□□□□ -2.08
RFX3P48380 U6.99-201ENST00000637524 83 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms