Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MIR4270-201ENST00000581799 70 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 AC090616.3-201ENST00000582184 217 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 DNAJC19P2-201ENST00000593340 302 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 SNORD91B-202ENST00000608459 222 ntBASIC4.63□□□□□ -1.67
CHRNA4P43681 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA4P43681 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA4P43681 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA4P43681 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHRNA4P43681 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CHRNA4P43681 ZNF137P-201ENST00000456718 1920 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.62□□□□□ -1.67
CHRNA4P43681 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-37P-201ENST00000362692 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-11P-201ENST00000364234 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-7-201ENST00000364784 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-8-201ENST00000365467 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 Y_RNA.369-201ENST00000365568 117 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNA5SP151-201ENST00000365632 117 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-25P-201ENST00000383873 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-1-201ENST00000383898 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-36P-201ENST00000384172 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-4P-201ENST00000384205 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-5P-201ENST00000384238 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-3P-201ENST00000384314 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-16P-201ENST00000384385 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-15P-201ENST00000384534 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-2-201ENST00000384627 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-29P-201ENST00000384637 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-9-201ENST00000384776 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHRNA4P43681 LAP3P1-201ENST00000403648 294 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 FAR2P2-201ENST00000413041 594 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 AL031736.2-201ENST00000426573 787 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 WARS2P1-201ENST00000429678 537 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 RPS15AP7-201ENST00000439294 405 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.62□□□□□ -1.67
CHRNA4P43681 AC007686.1-201ENST00000488511 463 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.62□□□□□ -1.67
CHRNA4P43681 FCF1P8-201ENST00000510322 597 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA4P43681 RNA5SP446-201ENST00000515955 82 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA4P43681 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA4P43681 RNU6-6P-201ENST00000606623 107 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 MIR7703-201ENST00000620784 77 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.62□□□□□ -1.67
CHRNA4P43681 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CHRNA4P43681 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
CHRNA4P43681 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA4P43681 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHRNA4P43681 MAPK10-263ENST00000641052 4307 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.61□□□□□ -1.67
CHRNA4P43681 RNVU1-3-201ENST00000364313 161 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 RNU6-76P-201ENST00000384060 104 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 MIR298-201ENST00000401212 88 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 Z98745.1-201ENST00000402553 494 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 SNORD12B-201ENST00000410433 91 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 RPS12P23-201ENST00000419579 400 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.61□□□□□ -1.67
CHRNA4P43681 RPS27AP13-201ENST00000498403 237 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.61□□□□□ -1.67
CHRNA4P43681 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.61□□□□□ -1.67
CHRNA4P43681 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.61□□□□□ -1.67
CHRNA4P43681 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.61□□□□□ -1.67
CHRNA4P43681 MIR6810-201ENST00000622701 70 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 snoU18.1-201ENST00000629629 71 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHRNA4P43681 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.61□□□□□ -1.67
CHRNA4P43681 AC005332.5-201ENST00000591222 2919 ntBASIC4.61□□□□□ -1.67
CHRNA4P43681 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHRNA4P43681 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHRNA4P43681 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHRNA4P43681 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHRNA4P43681 OR14L1P-202ENST00000641545 3009 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CHRNA4P43681 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.6□□□□□ -1.67
CHRNA4P43681 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.6□□□□□ -1.67
CHRNA4P43681 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHRNA4P43681 RNA5SP197-201ENST00000363357 119 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 RNU6-879P-201ENST00000364328 108 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 Y_RNA.230-201ENST00000364348 109 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 RNU6-512P-201ENST00000364438 103 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 RNVU1-6-201ENST00000364688 164 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 SNORA71.2-201ENST00000364941 134 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHRNA4P43681 AC099336.2-201ENST00000422457 254 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.6□□□□□ -1.67
CHRNA4P43681 RPL23AP93-201ENST00000440847 484 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AC099560.2-201ENST00000457554 255 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 snoU13.30-201ENST00000458951 104 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms