Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DEFB109C-201ENST00000382575 264 ntBASIC4.29□□□□□ -1.72
CCNFP41002 DEFB109B-201ENST00000382656 264 ntBASIC4.29□□□□□ -1.72
CCNFP41002 SNORA51.11-201ENST00000384442 131 ntBASIC4.29□□□□□ -1.72
CCNFP41002 RNU6-700P-201ENST00000391043 107 ntBASIC4.29□□□□□ -1.72
CCNFP41002 U3.42-201ENST00000408746 214 ntBASIC4.29□□□□□ -1.72
CCNFP41002 TMSB10P2-201ENST00000416049 131 ntBASIC4.29□□□□□ -1.72
CCNFP41002 AC007098.1-201ENST00000420122 367 ntBASIC4.29□□□□□ -1.72
CCNFP41002 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNFP41002 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNFP41002 TPT1P12-201ENST00000448968 492 ntBASIC4.29□□□□□ -1.72
CCNFP41002 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNFP41002 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNFP41002 AC092798.1-201ENST00000458542 409 ntBASIC4.29□□□□□ -1.72
CCNFP41002 RPL35AP15-201ENST00000468042 339 ntBASIC4.29□□□□□ -1.72
CCNFP41002 RN7SL283P-201ENST00000489055 303 ntBASIC4.29□□□□□ -1.72
CCNFP41002 SNORA40.14-201ENST00000516543 86 ntBASIC4.29□□□□□ -1.72
CCNFP41002 RN7SKP289-201ENST00000517244 295 ntBASIC4.29□□□□□ -1.72
CCNFP41002 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNFP41002 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNFP41002 AC006064.5-201ENST00000541782 248 ntBASIC4.29□□□□□ -1.72
CCNFP41002 HSPE1P5-201ENST00000561489 272 ntBASIC4.29□□□□□ -1.72
CCNFP41002 MIR5096-201ENST00000583713 70 ntBASIC4.29□□□□□ -1.72
CCNFP41002 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
CCNFP41002 HMGB1P50-201ENST00000605814 607 ntBASIC4.29□□□□□ -1.72
CCNFP41002 uc_338.13-201ENST00000618243 179 ntBASIC4.29□□□□□ -1.72
CCNFP41002 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNFP41002 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNFP41002 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCNFP41002 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCNFP41002 ZNF299P-201ENST00000406845 1804 ntBASIC4.28□□□□□ -1.72
CCNFP41002 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCNFP41002 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 MIR628-201ENST00000385229 95 ntBASIC4.28□□□□□ -1.72
CCNFP41002 SNORA40C-201ENST00000391285 128 ntBASIC4.28□□□□□ -1.72
CCNFP41002 PPIAP31-201ENST00000405422 495 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNFP41002 ELOCP19-201ENST00000411919 318 ntBASIC4.28□□□□□ -1.72
CCNFP41002 DNAJC19P7-201ENST00000428811 344 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AL159987.2-201ENST00000432754 307 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AL078601.1-201ENST00000444542 271 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNFP41002 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNFP41002 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 RNU6-377P-201ENST00000515965 102 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNFP41002 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNFP41002 AP000889.1-201ENST00000530968 660 ntBASIC4.28□□□□□ -1.72
CCNFP41002 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CCNFP41002 TRAV28-201ENST00000557548 323 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNFP41002 AC020914.4-201ENST00000597690 277 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC078899.3-201ENST00000599065 212 ntBASIC4.28□□□□□ -1.72
CCNFP41002 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.28□□□□□ -1.72
CCNFP41002 AC007785.2-201ENST00000598627 1916 ntBASIC4.28□□□□□ -1.72
CCNFP41002 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCNFP41002 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 FAM35DP-201ENST00000323387 2712 ntBASIC4.28□□□□□ -1.72
CCNFP41002 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNFP41002 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCNFP41002 AL672296.1-201ENST00000427780 2158 ntBASIC4.27□□□□□ -1.73
CCNFP41002 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNFP41002 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 RNA5SP447-201ENST00000363749 119 ntBASIC4.27□□□□□ -1.73
CCNFP41002 Y_RNA.307-201ENST00000365022 117 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNU5E-7P-201ENST00000365290 117 ntBASIC4.27□□□□□ -1.73
CCNFP41002 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CCNFP41002 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCNFP41002 Y_RNA.396-201ENST00000383949 103 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNU6-166P-201ENST00000384371 107 ntBASIC4.27□□□□□ -1.73
CCNFP41002 MIR493-201ENST00000385254 89 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNU6-1197P-201ENST00000391183 107 ntBASIC4.27□□□□□ -1.73
CCNFP41002 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNFP41002 SNORA11F-201ENST00000408237 128 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AL117339.3-201ENST00000418733 162 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNFP41002 AC091390.1-201ENST00000433904 331 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNFP41002 PHBP16-201ENST00000446318 950 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RN7SL98P-201ENST00000462271 300 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RN7SL385P-201ENST00000468873 276 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNU6-397P-201ENST00000516226 104 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNY3P15-201ENST00000516297 97 ntBASIC4.27□□□□□ -1.73
CCNFP41002 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.27□□□□□ -1.73
CCNFP41002 MIR2114-201ENST00000516645 80 ntBASIC4.27□□□□□ -1.73
CCNFP41002 IGLVIV-65-201ENST00000517313 360 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNFP41002 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNFP41002 VN1R91P-201ENST00000594377 169 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AC113403.1-201ENST00000604910 193 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AL356218.2-201ENST00000605264 187 ntBASIC4.27□□□□□ -1.73
CCNFP41002 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNFP41002 AC062037.2-201ENST00000610137 73 ntBASIC4.27□□□□□ -1.73
CCNFP41002 MIR8076-201ENST00000611401 83 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms