Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 RNU4-55P-201ENST00000410731 137 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 AL353193.1-201ENST00000421444 268 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 DPPA2P1-201ENST00000428060 556 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC073464.1-201ENST00000429823 534 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 MTCO2P11-201ENST00000431069 680 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AL596276.1-201ENST00000434465 418 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 MTATP6P16-201ENST00000434543 526 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC112220.1-201ENST00000434628 355 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 RBMX2P4-201ENST00000441256 376 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXA13P31271 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXA13P31271 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 RNU6-123P-201ENST00000516163 102 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXA13P31271 AP001646.1-201ENST00000527936 915 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 OR5AL2P-201ENST00000532185 920 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXA13P31271 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 AC174048.1-201ENST00000603389 144 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AL670379.4-201ENST00000605279 254 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXA13P31271 AL359547.2-201ENST00000615810 418 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 U6atac.1-201ENST00000616025 117 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC025034.2-201ENST00000623264 286 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HOXA13P31271 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA13P31271 AL136360.1-201ENST00000503377 1900 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA13P31271 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HOXA13P31271 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXA13P31271 RNU6-1097P-201ENST00000363586 107 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HOXA13P31271 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXA13P31271 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 RNU2-9P-201ENST00000410194 145 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA13P31271 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA13P31271 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA13P31271 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA13P31271 MTCYBP5-201ENST00000423752 1135 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA13P31271 MRPS10P2-201ENST00000431226 381 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA13P31271 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC006512.1-201ENST00000468816 291 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC126389.1-201ENST00000477436 290 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC079382.1-201ENST00000493346 557 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXA13P31271 ARL4AP2-201ENST00000507378 601 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA13P31271 Y_RNA.704-201ENST00000516851 102 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXA13P31271 AL133241.1-201ENST00000556832 487 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC092325.1-201ENST00000566449 554 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 MIR3162-201ENST00000581818 82 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 NUTF2P8-201ENST00000604593 363 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HOXA13P31271 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
HOXA13P31271 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA13P31271 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA13P31271 SNORA62.1-201ENST00000364287 154 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 Y_RNA.367-201ENST00000365544 101 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 RNU6-108P-201ENST00000365558 107 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 MIR196B-201ENST00000384852 84 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 MIR301A-201ENST00000385261 86 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 EIF1P1-201ENST00000421436 341 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 MTCO2P19-201ENST00000427513 598 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 AC022364.2-201ENST00000457963 554 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 AC019235.1-201ENST00000503847 207 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA13P31271 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 RNU6-914P-201ENST00000516749 109 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA13P31271 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA13P31271 NRBF2P5-201ENST00000603087 788 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 AL359880.1-201ENST00000621879 266 ntBASIC3.09□□□□□ -1.91
HOXA13P31271 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA13P31271 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXA13P31271 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
HOXA13P31271 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms