Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SNORA31.3-201ENST00000516029 96 ntBASIC1.87□□□□□ -2.11
THRAP10827 RN7SKP219-201ENST00000516825 296 ntBASIC1.87□□□□□ -2.11
THRAP10827 AC105245.1-201ENST00000581934 244 ntBASIC1.87□□□□□ -2.11
THRAP10827 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.87□□□□□ -2.11
THRAP10827 AC068790.3-201ENST00000602988 553 ntBASIC1.87□□□□□ -2.11
THRAP10827 AC091152.3-201ENST00000604227 325 ntBASIC1.87□□□□□ -2.11
THRAP10827 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
THRAP10827 AC072039.2-201ENST00000608883 439 ntBASIC1.87□□□□□ -2.11
THRAP10827 AL359854.1-201ENST00000614203 1594 ntBASIC1.87□□□□□ -2.11
THRAP10827 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
THRAP10827 AC012150.2-201ENST00000621300 544 ntBASIC1.87□□□□□ -2.11
THRAP10827 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
THRAP10827 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
THRAP10827 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
THRAP10827 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
THRAP10827 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
THRAP10827 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
THRAP10827 NACAP2-201ENST00000318548 624 ntBASIC1.86□□□□□ -2.11
THRAP10827 SNORA4.1-201ENST00000364263 144 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNU6-512P-201ENST00000364438 103 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNA5SP125-201ENST00000364843 120 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNU6-658P-201ENST00000384606 106 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNU6-19P-201ENST00000384718 107 ntBASIC1.86□□□□□ -2.11
THRAP10827 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
THRAP10827 USP9YP6-201ENST00000413550 854 ntBASIC1.86□□□□□ -2.11
THRAP10827 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
THRAP10827 RPS3AP44-201ENST00000425466 790 ntBASIC1.86□□□□□ -2.11
THRAP10827 PTGES3P4-201ENST00000426243 356 ntBASIC1.86□□□□□ -2.11
THRAP10827 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.86□□□□□ -2.11
THRAP10827 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.86□□□□□ -2.11
THRAP10827 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.86□□□□□ -2.11
THRAP10827 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.86□□□□□ -2.11
THRAP10827 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.86□□□□□ -2.11
THRAP10827 AC055855.1-201ENST00000489563 579 ntBASIC1.86□□□□□ -2.11
THRAP10827 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.86□□□□□ -2.11
THRAP10827 RPF2P2-201ENST00000504693 896 ntBASIC1.86□□□□□ -2.11
THRAP10827 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.86□□□□□ -2.11
THRAP10827 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
THRAP10827 RNA5SP112-201ENST00000515937 99 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNA5SP458-201ENST00000516188 119 ntBASIC1.86□□□□□ -2.11
THRAP10827 RNU6-64P-201ENST00000517119 105 ntBASIC1.86□□□□□ -2.11
THRAP10827 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.86□□□□□ -2.11
THRAP10827 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.86□□□□□ -2.11
THRAP10827 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
THRAP10827 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.86□□□□□ -2.11
THRAP10827 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.86□□□□□ -2.11
THRAP10827 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
THRAP10827 AL391001.1-201ENST00000602747 715 ntBASIC1.86□□□□□ -2.11
THRAP10827 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
THRAP10827 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
THRAP10827 AL158050.2-201ENST00000605336 568 ntBASIC1.86□□□□□ -2.11
THRAP10827 AC009269.6-201ENST00000621778 588 ntBASIC1.86□□□□□ -2.11
THRAP10827 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
THRAP10827 MIR147B-201ENST00000390185 80 ntBASIC1.85□□□□□ -2.11
THRAP10827 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
THRAP10827 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.85□□□□□ -2.11
THRAP10827 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.85□□□□□ -2.11
THRAP10827 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.85□□□□□ -2.11
THRAP10827 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.85□□□□□ -2.11
THRAP10827 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL445669.1-201ENST00000426743 755 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.85□□□□□ -2.11
THRAP10827 AC004383.1-201ENST00000438135 289 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL136380.1-201ENST00000447970 162 ntBASIC1.85□□□□□ -2.11
THRAP10827 CKS1BP2-201ENST00000497342 240 ntBASIC1.85□□□□□ -2.11
THRAP10827 MTCYBP43-201ENST00000513621 740 ntBASIC1.85□□□□□ -2.11
THRAP10827 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.85□□□□□ -2.11
THRAP10827 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
THRAP10827 DEFB108A-201ENST00000530110 222 ntBASIC1.85□□□□□ -2.11
THRAP10827 AP000907.2-201ENST00000530827 353 ntBASIC1.85□□□□□ -2.11
THRAP10827 AC068587.4-201ENST00000533893 186 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL121821.2-201ENST00000556081 394 ntBASIC1.85□□□□□ -2.11
THRAP10827 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
THRAP10827 MIR4293-201ENST00000584305 78 ntBASIC1.85□□□□□ -2.11
THRAP10827 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.85□□□□□ -2.11
THRAP10827 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
THRAP10827 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
THRAP10827 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
THRAP10827 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
THRAP10827 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
THRAP10827 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
THRAP10827 RNU5A-8P-201ENST00000364102 114 ntBASIC1.84□□□□□ -2.11
THRAP10827 RNU6-723P-201ENST00000383973 107 ntBASIC1.84□□□□□ -2.11
THRAP10827 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
THRAP10827 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.84□□□□□ -2.11
THRAP10827 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.84□□□□□ -2.11
THRAP10827 AL117351.1-201ENST00000438864 766 ntBASIC1.84□□□□□ -2.11
THRAP10827 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.84□□□□□ -2.11
THRAP10827 MTND3P1-201ENST00000441336 220 ntBASIC1.84□□□□□ -2.11
THRAP10827 AC124916.1-201ENST00000444020 547 ntBASIC1.84□□□□□ -2.11
THRAP10827 EXOSC3P1-201ENST00000448649 500 ntBASIC1.84□□□□□ -2.11
THRAP10827 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.84□□□□□ -2.11
THRAP10827 AC108059.3-201ENST00000456388 214 ntBASIC1.84□□□□□ -2.11
THRAP10827 AL441985.1-201ENST00000457727 251 ntBASIC1.84□□□□□ -2.11
THRAP10827 PMCHL2-203ENST00000457791 237 ntBASIC1.84□□□□□ -2.11
THRAP10827 MTAPP1-201ENST00000489154 819 ntBASIC1.84□□□□□ -2.11
THRAP10827 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.84□□□□□ -2.11
THRAP10827 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
THRAP10827 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms