Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.78□□□□□ -2.12
TPM1P09493 ZNF876P-202ENST00000398732 1485 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC138393.1-203ENST00000327086 343 ntBASIC1.77□□□□□ -2.13
TPM1P09493 RNU6-289P-201ENST00000364093 107 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL033519.2-201ENST00000403958 392 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL133475.1-201ENST00000404414 305 ntBASIC1.77□□□□□ -2.13
TPM1P09493 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
TPM1P09493 RNU6-1140P-201ENST00000410517 106 ntBASIC1.77□□□□□ -2.13
TPM1P09493 EIF4EP2-201ENST00000422816 654 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.77□□□□□ -2.13
TPM1P09493 SNRPEP7-201ENST00000438350 220 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC006512.1-201ENST00000468816 291 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC027575.1-201ENST00000481064 460 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
TPM1P09493 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM1P09493 AC023194.1-201ENST00000493084 308 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM1P09493 AC092436.1-201ENST00000506450 503 ntBASIC1.77□□□□□ -2.13
TPM1P09493 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
TPM1P09493 AP003049.1-201ENST00000529418 457 ntBASIC1.77□□□□□ -2.13
TPM1P09493 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.77□□□□□ -2.13
TPM1P09493 MIR4782-201ENST00000577987 79 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
TPM1P09493 AC093673.2-201ENST00000609674 331 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC103710.2-201ENST00000609912 942 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL512506.1-201ENST00000613918 449 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL359314.1-201ENST00000616913 261 ntBASIC1.77□□□□□ -2.13
TPM1P09493 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM1P09493 SCARNA15.3-201ENST00000626315 122 ntBASIC1.77□□□□□ -2.13
TPM1P09493 SCARNA4.1-201ENST00000628597 123 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AC092192.1-201ENST00000633154 1018 ntBASIC1.77□□□□□ -2.13
TPM1P09493 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.77□□□□□ -2.13
TPM1P09493 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TPM1P09493 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TPM1P09493 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TPM1P09493 DDX43P2-201ENST00000604753 1354 ntBASIC1.76□□□□□ -2.13
TPM1P09493 MIR29C-201ENST00000385231 88 ntBASIC1.76□□□□□ -2.13
TPM1P09493 Y_RNA.578-201ENST00000390903 88 ntBASIC1.76□□□□□ -2.13
TPM1P09493 RNA5SP465-201ENST00000391195 109 ntBASIC1.76□□□□□ -2.13
TPM1P09493 SNORA40.18-201ENST00000391200 128 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC068050.1-201ENST00000394891 380 ntBASIC1.76□□□□□ -2.13
TPM1P09493 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
TPM1P09493 USP9YP21-201ENST00000420603 432 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AL953862.1-201ENST00000423016 168 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.76□□□□□ -2.13
TPM1P09493 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM1P09493 HMGB1P27-201ENST00000431429 603 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM1P09493 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM1P09493 MEMO1P3-201ENST00000459811 302 ntBASIC1.76□□□□□ -2.13
TPM1P09493 RPL7P43-201ENST00000478876 753 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC069528.1-202ENST00000482888 637 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC104564.1-201ENST00000493028 407 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC093752.1-206ENST00000511823 336 ntBASIC1.76□□□□□ -2.13
TPM1P09493 MTCO3P27-201ENST00000514397 196 ntBASIC1.76□□□□□ -2.13
TPM1P09493 RNU6-1028P-201ENST00000517164 93 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
TPM1P09493 AL670379.10-201ENST00000604330 253 ntBASIC1.76□□□□□ -2.13
TPM1P09493 AL670379.9-201ENST00000605428 253 ntBASIC1.76□□□□□ -2.13
TPM1P09493 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
TPM1P09493 MIR449A-201ENST00000362113 91 ntBASIC1.75□□□□□ -2.13
TPM1P09493 RNU1-57P-201ENST00000384491 166 ntBASIC1.75□□□□□ -2.13
TPM1P09493 RSL24D1P4-201ENST00000400938 484 ntBASIC1.75□□□□□ -2.13
TPM1P09493 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM1P09493 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM1P09493 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.75□□□□□ -2.13
TPM1P09493 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.75□□□□□ -2.13
TPM1P09493 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.75□□□□□ -2.13
TPM1P09493 RPF2P2-201ENST00000504693 896 ntBASIC1.75□□□□□ -2.13
TPM1P09493 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.75□□□□□ -2.13
TPM1P09493 RNU6-970P-201ENST00000516312 107 ntBASIC1.75□□□□□ -2.13
TPM1P09493 RNU6-667P-201ENST00000517186 102 ntBASIC1.75□□□□□ -2.13
TPM1P09493 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TPM1P09493 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM1P09493 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.75□□□□□ -2.13
TPM1P09493 AC107952.2-201ENST00000606048 486 ntBASIC1.75□□□□□ -2.13
TPM1P09493 AC104985.3-201ENST00000623479 597 ntBASIC1.75□□□□□ -2.13
TPM1P09493 PCMTD1P7-201ENST00000634506 357 ntBASIC1.75□□□□□ -2.13
TPM1P09493 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TPM1P09493 TEX21P-201ENST00000447107 1476 ntBASIC1.75□□□□□ -2.13
TPM1P09493 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.74□□□□□ -2.13
TPM1P09493 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
TPM1P09493 RNU6-1032P-201ENST00000384100 107 ntBASIC1.74□□□□□ -2.13
TPM1P09493 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.74□□□□□ -2.13
TPM1P09493 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM1P09493 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM1P09493 AC005094.1-201ENST00000440420 368 ntBASIC1.74□□□□□ -2.13
TPM1P09493 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM1P09493 FCF1P6-201ENST00000456841 595 ntBASIC1.74□□□□□ -2.13
TPM1P09493 RNU7-59P-201ENST00000459101 61 ntBASIC1.74□□□□□ -2.13
TPM1P09493 CYCSP27-201ENST00000527643 293 ntBASIC1.74□□□□□ -2.13
TPM1P09493 AC087894.1-201ENST00000538359 518 ntBASIC1.74□□□□□ -2.13
TPM1P09493 MTCYBP23-201ENST00000558717 1102 ntBASIC1.74□□□□□ -2.13
TPM1P09493 AL356432.3-201ENST00000568952 465 ntBASIC1.74□□□□□ -2.13
TPM1P09493 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.74□□□□□ -2.13
TPM1P09493 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM1P09493 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.74□□□□□ -2.13
TPM1P09493 AP002802.2-201ENST00000605877 235 ntBASIC1.74□□□□□ -2.13
TPM1P09493 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.74□□□□□ -2.13
TPM1P09493 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms