Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.689-201ENST00000516589 107 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 OR4H12P-201ENST00000556269 907 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC005951.2-201ENST00000576282 495 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC023043.2-201ENST00000589678 1026 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 AL162274.2-201ENST00000614406 332 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 AC008121.3-201ENST00000618726 433 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.86□□□□□ -1.79
HLA-DOAP06340 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOAP06340 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DOAP06340 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOAP06340 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 Y_RNA.187-201ENST00000363918 113 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 RNU6-82P-201ENST00000363970 107 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 SNORD116-11-201ENST00000383882 92 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 Y_RNA.459-201ENST00000384251 102 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 RNU6-14P-201ENST00000384630 106 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 RNA5SP111-201ENST00000411386 101 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 MTND1P17-201ENST00000448961 204 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC006445.1-201ENST00000491925 405 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC021146.2-201ENST00000504736 556 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC018630.1-201ENST00000541376 925 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC093012.1-202ENST00000549403 582 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 MIR5692C1-201ENST00000585309 91 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC136443.5-201ENST00000603741 370 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 AL138726.1-201ENST00000614873 333 ntBASIC3.85□□□□□ -1.79
HLA-DOAP06340 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HLA-DOAP06340 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DOAP06340 Z73965.1-201ENST00000623412 2297 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DOAP06340 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DOAP06340 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 DDX18P3-201ENST00000404856 2007 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC103710.2-202ENST00000641454 2853 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 RNU6-288P-201ENST00000363690 104 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 RNU6-715P-201ENST00000365204 103 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DOAP06340 RNU6-76P-201ENST00000384060 104 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 RNU6-310P-201ENST00000384655 107 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 Y_RNA.646-201ENST00000410980 101 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL669831.1-202ENST00000428504 417 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC009901.1-201ENST00000506703 541 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 HIGD1AP13-201ENST00000509878 289 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 PTP4A1P4-201ENST00000512479 322 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 RNA5SP341-201ENST00000516261 117 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC090281.1-201ENST00000523019 276 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 IMMP1LP2-201ENST00000552954 492 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC090115.3-201ENST00000553218 849 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL670379.6-201ENST00000603753 252 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL670379.1-201ENST00000604752 252 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL670379.5-201ENST00000605253 252 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL670379.8-201ENST00000605353 252 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL670379.7-201ENST00000605823 252 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AC009570.1-201ENST00000609599 745 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DOAP06340 MTND5P42-201ENST00000637720 498 ntBASIC3.84□□□□□ -1.79
HLA-DOAP06340 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DOAP06340 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DOAP06340 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DOAP06340 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 Y_RNA.135-201ENST00000363439 95 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 U3.15-201ENST00000365398 212 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AL356057.3-201ENST00000402607 340 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 RPS4XP7-201ENST00000406274 780 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 Y_RNA.605-201ENST00000410577 105 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC002075.2-201ENST00000425207 252 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AL160004.2-201ENST00000432935 350 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms