Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC131159.1-201ENST00000621854 213 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC023510.2-201ENST00000622162 746 ntBASIC1.85□□□□□ -2.11
CD74P04233 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.85□□□□□ -2.11
CD74P04233 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.85□□□□□ -2.11
CD74P04233 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.85□□□□□ -2.11
CD74P04233 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CD74P04233 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.84□□□□□ -2.11
CD74P04233 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.84□□□□□ -2.11
CD74P04233 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CD74P04233 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CD74P04233 RNA5SP68-201ENST00000363885 119 ntBASIC1.84□□□□□ -2.11
CD74P04233 RNU6-501P-201ENST00000364072 100 ntBASIC1.84□□□□□ -2.11
CD74P04233 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
CD74P04233 CIR1P3-201ENST00000405137 479 ntBASIC1.84□□□□□ -2.11
CD74P04233 RNU2-36P-201ENST00000410361 191 ntBASIC1.84□□□□□ -2.11
CD74P04233 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
CD74P04233 NDUFS5P4-201ENST00000412983 318 ntBASIC1.84□□□□□ -2.11
CD74P04233 CYCSP48-201ENST00000417124 323 ntBASIC1.84□□□□□ -2.11
CD74P04233 RPS15AP12-201ENST00000419498 388 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.84□□□□□ -2.11
CD74P04233 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 AL512286.1-201ENST00000439244 400 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC098831.1-201ENST00000440661 216 ntBASIC1.84□□□□□ -2.11
CD74P04233 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.84□□□□□ -2.11
CD74P04233 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 RNU7-125P-201ENST00000458760 62 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC090515.1-201ENST00000465295 476 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC139453.3-201ENST00000493276 369 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC098591.2-201ENST00000510152 315 ntBASIC1.84□□□□□ -2.11
CD74P04233 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.84□□□□□ -2.11
CD74P04233 AC022616.6-201ENST00000520479 119 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.84□□□□□ -2.11
CD74P04233 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CD74P04233 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.84□□□□□ -2.11
CD74P04233 AL359212.1-201ENST00000556608 614 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC234778.2-201ENST00000566241 354 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC091489.2-201ENST00000566263 604 ntBASIC1.84□□□□□ -2.11
CD74P04233 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.84□□□□□ -2.11
CD74P04233 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.84□□□□□ -2.11
CD74P04233 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.84□□□□□ -2.11
CD74P04233 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.84□□□□□ -2.11
CD74P04233 AC116312.1-201ENST00000606841 314 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC034229.4-201ENST00000607861 441 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC069294.1-201ENST00000608397 350 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC046143.2-201ENST00000609789 160 ntBASIC1.84□□□□□ -2.11
CD74P04233 AC027807.2-201ENST00000616099 408 ntBASIC1.84□□□□□ -2.11
CD74P04233 U4atac.1-201ENST00000618345 95 ntBASIC1.84□□□□□ -2.11
CD74P04233 AL162373.1-201ENST00000620433 407 ntBASIC1.84□□□□□ -2.11
CD74P04233 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.84□□□□□ -2.11
CD74P04233 AC243829.7-201ENST00000633081 225 ntBASIC1.84□□□□□ -2.11
CD74P04233 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CD74P04233 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
CD74P04233 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CD74P04233 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CD74P04233 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CD74P04233 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.83□□□□□ -2.12
CD74P04233 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CD74P04233 RNU1-73P-201ENST00000383971 164 ntBASIC1.83□□□□□ -2.12
CD74P04233 RNU6-658P-201ENST00000384606 106 ntBASIC1.83□□□□□ -2.12
CD74P04233 SNORA67.4-201ENST00000384688 142 ntBASIC1.83□□□□□ -2.12
CD74P04233 AL021407.1-201ENST00000404531 386 ntBASIC1.83□□□□□ -2.12
CD74P04233 RNU2-62P-201ENST00000410868 191 ntBASIC1.83□□□□□ -2.12
CD74P04233 RNU6-1328P-201ENST00000410938 106 ntBASIC1.83□□□□□ -2.12
CD74P04233 RN7SKP284-201ENST00000411002 343 ntBASIC1.83□□□□□ -2.12
CD74P04233 BPY2DP-201ENST00000422208 265 ntBASIC1.83□□□□□ -2.12
CD74P04233 RAC1P6-201ENST00000423911 575 ntBASIC1.83□□□□□ -2.12
CD74P04233 AL353777.1-201ENST00000425552 326 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.83□□□□□ -2.12
CD74P04233 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 AL590365.1-201ENST00000450788 243 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 KLF3P2-201ENST00000465138 268 ntBASIC1.83□□□□□ -2.12
CD74P04233 MTCYBP35-201ENST00000503630 1137 ntBASIC1.83□□□□□ -2.12
CD74P04233 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 AC008413.1-201ENST00000511864 177 ntBASIC1.83□□□□□ -2.12
CD74P04233 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
CD74P04233 RNU6-201P-201ENST00000517100 61 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CD74P04233 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CD74P04233 AP002770.2-201ENST00000543613 532 ntBASIC1.83□□□□□ -2.12
CD74P04233 AL512310.1-201ENST00000548639 172 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 AL133241.1-201ENST00000556832 487 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.83□□□□□ -2.12
CD74P04233 MIR3118-1-201ENST00000581787 76 ntBASIC1.83□□□□□ -2.12
CD74P04233 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC007363.1-201ENST00000604736 620 ntBASIC1.83□□□□□ -2.12
CD74P04233 AL021997.1-201ENST00000605757 193 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
CD74P04233 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.83□□□□□ -2.12
CD74P04233 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.83□□□□□ -2.12
CD74P04233 AC006927.3-201ENST00000638789 384 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms