Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC092125.1-201ENST00000562568 1995 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL2A1P02458 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL2A1P02458 Y_RNA.184-201ENST00000363884 108 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RNU6-853P-201ENST00000364306 107 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RNU6-1322P-201ENST00000364309 107 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RNU6-343P-201ENST00000364709 104 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL2A1P02458 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 RNU6-74P-201ENST00000384235 107 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RN7SKP140-201ENST00000411196 284 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.84□□□□□ -1.95
COL2A1P02458 AL365400.1-201ENST00000431854 640 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.84□□□□□ -1.95
COL2A1P02458 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL2A1P02458 SNRPEP7-201ENST00000438350 220 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.84□□□□□ -1.95
COL2A1P02458 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.84□□□□□ -1.95
COL2A1P02458 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 TTC39CP1-201ENST00000512513 755 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RNA5SP216-201ENST00000516111 123 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 RNU6-835P-201ENST00000516974 104 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AC104986.1-201ENST00000517978 436 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.84□□□□□ -1.95
COL2A1P02458 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.84□□□□□ -1.95
COL2A1P02458 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 AC020661.2-201ENST00000560114 134 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 NRBF2P1-201ENST00000587407 859 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AC115085.1-201ENST00000588924 229 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 OR10AB1P-201ENST00000609613 938 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 AC046143.2-201ENST00000609789 160 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.84□□□□□ -1.95
COL2A1P02458 AL133216.2-202ENST00000634512 349 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 XPOTP1-201ENST00000443317 2398 ntBASIC2.84□□□□□ -1.95
COL2A1P02458 MTND4P27-201ENST00000450813 1354 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.84□□□□□ -1.96
COL2A1P02458 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL2A1P02458 Y_RNA.72-201ENST00000362894 103 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 Y_RNA.118-201ENST00000363300 101 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 RNY4P16-201ENST00000364768 94 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 SNORA20.2-201ENST00000383922 131 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 RNU6-474P-201ENST00000384243 107 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 Y_RNA.481-201ENST00000384373 102 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 SNORA41-201ENST00000384675 132 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 Y_RNA.579-201ENST00000390939 94 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC016769.3-201ENST00000396562 315 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AL354719.1-201ENST00000406535 843 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 MIR1305-201ENST00000408300 86 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 Y_RNA.615-201ENST00000410769 117 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.84□□□□□ -1.96
COL2A1P02458 RPL36P19-201ENST00000430744 301 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 RSU1P2-202ENST00000437884 485 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 SEPT14P3-201ENST00000439401 183 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 CALM1P1-201ENST00000442082 433 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AL732372.2-207ENST00000445840 183 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.84□□□□□ -1.96
COL2A1P02458 AC005297.2-201ENST00000450430 606 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 SEPT14P2-201ENST00000453405 183 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.84□□□□□ -1.96
COL2A1P02458 VN1R17P-201ENST00000472048 1090 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AP000926.1-201ENST00000479573 241 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC233702.1-201ENST00000482905 502 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.84□□□□□ -1.96
COL2A1P02458 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.84□□□□□ -1.96
COL2A1P02458 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.84□□□□□ -1.96
COL2A1P02458 SEPT14P4-201ENST00000513445 186 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.84□□□□□ -1.96
COL2A1P02458 RNU4-49P-201ENST00000516080 140 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 RN7SKP219-201ENST00000516825 296 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 RNU6-1003P-201ENST00000517099 105 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC107934.1-201ENST00000522215 217 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC022861.1-201ENST00000522981 663 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 FO082796.1-201ENST00000523795 183 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.84□□□□□ -1.96
COL2A1P02458 AC026464.5-201ENST00000562497 722 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC025281.1-201ENST00000567026 265 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC009163.5-201ENST00000575421 637 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 MIR3171-201ENST00000584270 74 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AP001029.3-201ENST00000588063 596 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC103710.3-201ENST00000608157 948 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 AC093913.1-201ENST00000614178 329 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 MIR7973-1-201ENST00000614683 76 ntBASIC2.84□□□□□ -1.96
COL2A1P02458 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.83□□□□□ -1.96
COL2A1P02458 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.83□□□□□ -1.96
COL2A1P02458 AL512646.1-201ENST00000269395 1077 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 Y_RNA.40-201ENST00000362645 93 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RNU1-73P-201ENST00000383971 164 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RNU6-606P-201ENST00000384721 111 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 SNORD115.1-201ENST00000391109 76 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 RPL23AP32-201ENST00000395315 459 ntBASIC2.83□□□□□ -1.96
COL2A1P02458 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms