Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 OR5AL2P-201ENST00000532185 920 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC079598.5-201ENST00000547460 117 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 AC026271.5-201ENST00000577873 130 ntBASIC1.75□□□□□ -2.13
VAPBO95292 MIR4299-201ENST00000577899 72 ntBASIC1.75□□□□□ -2.13
VAPBO95292 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.75□□□□□ -2.13
VAPBO95292 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.75□□□□□ -2.13
VAPBO95292 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.75□□□□□ -2.13
VAPBO95292 AC034229.4-201ENST00000607861 441 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC131235.4-201ENST00000609288 620 ntBASIC1.75□□□□□ -2.13
VAPBO95292 AC138393.1-203ENST00000327086 343 ntBASIC1.74□□□□□ -2.13
VAPBO95292 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VAPBO95292 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VAPBO95292 RNU5E-1-201ENST00000362477 120 ntBASIC1.74□□□□□ -2.13
VAPBO95292 RNU6-621P-201ENST00000364752 109 ntBASIC1.74□□□□□ -2.13
VAPBO95292 RNU6-413P-201ENST00000384115 107 ntBASIC1.74□□□□□ -2.13
VAPBO95292 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
VAPBO95292 RNU6-298P-201ENST00000390888 96 ntBASIC1.74□□□□□ -2.13
VAPBO95292 RNU6-278P-201ENST00000390945 109 ntBASIC1.74□□□□□ -2.13
VAPBO95292 AC078974.1-201ENST00000411597 223 ntBASIC1.74□□□□□ -2.13
VAPBO95292 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.74□□□□□ -2.13
VAPBO95292 RPL7P54-201ENST00000438336 674 ntBASIC1.74□□□□□ -2.13
VAPBO95292 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPBO95292 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPBO95292 AC011005.2-201ENST00000487324 359 ntBASIC1.74□□□□□ -2.13
VAPBO95292 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
VAPBO95292 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPBO95292 AC117522.2-201ENST00000510049 657 ntBASIC1.74□□□□□ -2.13
VAPBO95292 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VAPBO95292 LINC00933-203ENST00000559812 219 ntBASIC1.74□□□□□ -2.13
VAPBO95292 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.74□□□□□ -2.13
VAPBO95292 AC092953.2-201ENST00000608000 699 ntBASIC1.74□□□□□ -2.13
VAPBO95292 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.74□□□□□ -2.13
VAPBO95292 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VAPBO95292 AC109809.1-201ENST00000619665 545 ntBASIC1.74□□□□□ -2.13
VAPBO95292 AC012150.2-201ENST00000621300 544 ntBASIC1.74□□□□□ -2.13
VAPBO95292 AC116618.1-201ENST00000634617 774 ntBASIC1.74□□□□□ -2.13
VAPBO95292 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VAPBO95292 AL354685.2-201ENST00000448218 1447 ntBASIC1.74□□□□□ -2.13
VAPBO95292 CDC27P3-201ENST00000635418 1910 ntBASIC1.74□□□□□ -2.13
VAPBO95292 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAPBO95292 SNORA25B-201ENST00000365507 128 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AL449283.1-202ENST00000418249 604 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
VAPBO95292 MTND6P13-201ENST00000443510 523 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.73□□□□□ -2.13
VAPBO95292 RPL23AP3-201ENST00000453844 468 ntBASIC1.73□□□□□ -2.13
VAPBO95292 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.73□□□□□ -2.13
VAPBO95292 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.73□□□□□ -2.13
VAPBO95292 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
VAPBO95292 RPF2P2-201ENST00000504693 896 ntBASIC1.73□□□□□ -2.13
VAPBO95292 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VAPBO95292 AC112198.4-201ENST00000515450 351 ntBASIC1.73□□□□□ -2.13
VAPBO95292 SNORA48.11-201ENST00000517015 89 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.73□□□□□ -2.13
VAPBO95292 AC104581.2-201ENST00000572227 430 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC090897.2-201ENST00000581715 130 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.73□□□□□ -2.13
VAPBO95292 AC090970.3-201ENST00000612566 866 ntBASIC1.73□□□□□ -2.13
VAPBO95292 AC022202.1-201ENST00000613515 211 ntBASIC1.73□□□□□ -2.13
VAPBO95292 MIR6134-201ENST00000617606 109 ntBASIC1.73□□□□□ -2.13
VAPBO95292 LINC02211-204ENST00000642024 1070 ntBASIC1.73□□□□□ -2.13
VAPBO95292 TEX21P-201ENST00000447107 1476 ntBASIC1.73□□□□□ -2.13
VAPBO95292 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
VAPBO95292 AP000776.1-201ENST00000530032 1663 ntBASIC1.72□□□□□ -2.13
VAPBO95292 RNU6-1284P-201ENST00000363701 100 ntBASIC1.72□□□□□ -2.13
VAPBO95292 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VAPBO95292 RNU6-1140P-201ENST00000410517 106 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 RSU1P2-202ENST00000437884 485 ntBASIC1.72□□□□□ -2.13
VAPBO95292 MTND4P25-201ENST00000441039 533 ntBASIC1.72□□□□□ -2.13
VAPBO95292 BRK1P2-201ENST00000442875 223 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 BTF3P15-201ENST00000455606 336 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 AC023194.1-201ENST00000493084 308 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AC079395.1-201ENST00000510981 262 ntBASIC1.72□□□□□ -2.13
VAPBO95292 SNORA31.3-201ENST00000516029 96 ntBASIC1.72□□□□□ -2.13
VAPBO95292 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
VAPBO95292 RNU6-64P-201ENST00000517119 105 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AP000889.1-201ENST00000530968 660 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPBO95292 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.72□□□□□ -2.13
VAPBO95292 DUXAP1-201ENST00000556632 463 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AC013412.1-201ENST00000610687 192 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AC138627.2-201ENST00000624202 601 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AC099654.9-201ENST00000637055 678 ntBASIC1.72□□□□□ -2.13
VAPBO95292 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.72□□□□□ -2.13
VAPBO95292 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.72□□□□□ -2.13
VAPBO95292 RNU1-72P-201ENST00000362976 153 ntBASIC1.71□□□□□ -2.14
VAPBO95292 RNU6-288P-201ENST00000363690 104 ntBASIC1.71□□□□□ -2.14
VAPBO95292 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
VAPBO95292 SNORD116-12-201ENST00000384468 92 ntBASIC1.71□□□□□ -2.14
VAPBO95292 MIR95-201ENST00000385072 81 ntBASIC1.71□□□□□ -2.14
VAPBO95292 RNA5SP450-201ENST00000411206 102 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms