Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-660P-201ENST00000364566 109 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 RNU6-1083P-201ENST00000384022 107 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 RN7SKP32-201ENST00000410167 303 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.91□□□□□ -2.1
SEMA3DO95025 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.91□□□□□ -2.1
SEMA3DO95025 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 HMGN2P10-201ENST00000448085 265 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 PMCHL2-203ENST00000457791 237 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 RPL37P6-201ENST00000460682 294 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 HSPE1P18-201ENST00000517602 280 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 FAM92A1P1-201ENST00000528023 890 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC006199.1-201ENST00000548728 219 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.91□□□□□ -2.1
SEMA3DO95025 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.91□□□□□ -2.1
SEMA3DO95025 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA3DO95025 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AL391813.1-201ENST00000603098 260 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC008121.1-201ENST00000603244 268 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC090970.3-201ENST00000612566 866 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC022960.3-201ENST00000619794 441 ntBASIC1.91□□□□□ -2.1
SEMA3DO95025 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.91□□□□□ -2.1
SEMA3DO95025 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.9□□□□□ -2.1
SEMA3DO95025 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.9□□□□□ -2.1
SEMA3DO95025 RNU6-288P-201ENST00000363690 104 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 RNY3P13-201ENST00000365542 102 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 ZNF90P2-204ENST00000419323 1075 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 HMGB1P27-201ENST00000431429 603 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 Z98742.2-201ENST00000431564 187 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.9□□□□□ -2.11
SEMA3DO95025 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SEMA3DO95025 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 RPL23AP41-201ENST00000484754 458 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC020699.1-201ENST00000505161 445 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 RNU6-703P-201ENST00000516946 107 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.9□□□□□ -2.11
SEMA3DO95025 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AC123904.2-201ENST00000548059 300 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 MIR3167-201ENST00000579623 85 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 MIR4999-201ENST00000585029 91 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.9□□□□□ -2.11
SEMA3DO95025 AC011458.1-201ENST00000604034 617 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC007363.1-201ENST00000604736 620 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AC092953.2-201ENST00000608000 699 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AL031667.3-201ENST00000620124 655 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
SEMA3DO95025 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
SEMA3DO95025 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.9□□□□□ -2.11
SEMA3DO95025 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SEMA3DO95025 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
SEMA3DO95025 AL391994.1-201ENST00000254724 282 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 NACAP2-201ENST00000318548 624 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.89□□□□□ -2.11
SEMA3DO95025 SNORD113-6-201ENST00000363345 75 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.89□□□□□ -2.11
SEMA3DO95025 RNU6-253P-201ENST00000384730 105 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 U8.14-201ENST00000390843 143 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 RN7SKP158-201ENST00000410453 326 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AC013410.2-201ENST00000422627 201 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AC093106.2-201ENST00000428212 385 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AL592045.1-201ENST00000429867 352 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 MICF-203ENST00000432679 129 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AL161651.1-201ENST00000440882 223 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 MTND4P25-201ENST00000441039 533 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 NEFMP1-201ENST00000443423 1006 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.89□□□□□ -2.11
SEMA3DO95025 DYNLL1P5-201ENST00000467158 270 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AC034244.1-201ENST00000507687 207 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 TPT1P8-201ENST00000510120 555 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.89□□□□□ -2.11
SEMA3DO95025 ARL2BPP2-201ENST00000550907 489 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AL121821.2-201ENST00000556081 394 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 MIR3146-201ENST00000580367 79 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.89□□□□□ -2.11
SEMA3DO95025 KC877982.1-201ENST00000602313 470 ntBASIC1.89□□□□□ -2.11
SEMA3DO95025 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms