Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPHP4O75161 U8.1-201ENST00000362843 134 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 RNU6-359P-201ENST00000365466 108 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 RNU6-744P-201ENST00000365557 107 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 RNU6-1316P-201ENST00000384242 108 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 TXNP7-201ENST00000406296 293 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 RNU2-33P-201ENST00000410344 192 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 UBE2FP1-201ENST00000416536 447 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.99□□□□□ -2.09
NPHP4O75161 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.99□□□□□ -2.09
NPHP4O75161 AL451054.2-201ENST00000420896 202 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 RPS15AP5-201ENST00000436276 388 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 ZNF886P-201ENST00000450781 723 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPHP4O75161 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.99□□□□□ -2.09
NPHP4O75161 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.99□□□□□ -2.09
NPHP4O75161 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.99□□□□□ -2.09
NPHP4O75161 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.99□□□□□ -2.09
NPHP4O75161 AC023813.2-201ENST00000564321 469 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 AC010928.2-201ENST00000588017 287 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 AL138478.1-201ENST00000612252 832 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.99□□□□□ -2.09
NPHP4O75161 DDX10P1-201ENST00000448545 1933 ntBASIC1.99□□□□□ -2.09
NPHP4O75161 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
NPHP4O75161 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPHP4O75161 Y_RNA.205-201ENST00000364128 113 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 MIR1304-201ENST00000408243 91 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 U3.40-201ENST00000408706 208 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 MIR548J-201ENST00000408833 112 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 BTF3L4P3-201ENST00000418879 476 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.98□□□□□ -2.09
NPHP4O75161 RPL26P9-201ENST00000457466 433 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.98□□□□□ -2.09
NPHP4O75161 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 RNA5SP291-201ENST00000517222 105 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC022634.1-201ENST00000520765 532 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC021451.1-201ENST00000523498 1129 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPHP4O75161 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP4O75161 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.98□□□□□ -2.09
NPHP4O75161 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP4O75161 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.98□□□□□ -2.09
NPHP4O75161 MTATP6P3-201ENST00000581686 676 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.98□□□□□ -2.09
NPHP4O75161 BNIP3P26-201ENST00000600827 554 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AL357094.1-201ENST00000603845 844 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC013476.2-201ENST00000614456 459 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP4O75161 AC116618.1-201ENST00000634617 774 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
NPHP4O75161 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NPHP4O75161 RNU6-1080P-201ENST00000383982 107 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 RNU6-1000P-201ENST00000391066 106 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 TPMTP3-201ENST00000411928 735 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
NPHP4O75161 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.97□□□□□ -2.09
NPHP4O75161 AC010153.1-201ENST00000432862 727 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 MTATP6P30-201ENST00000443540 664 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 MTND1P18-201ENST00000448191 573 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 MTND1P16-201ENST00000465177 898 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 MTCYBP18-201ENST00000501056 747 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 FABP5P5-201ENST00000515537 406 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.97□□□□□ -2.09
NPHP4O75161 AF038458.1-201ENST00000588406 262 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.97□□□□□ -2.09
NPHP4O75161 PART1_2.1-201ENST00000612397 250 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 TUG1_2.1-201ENST00000614234 87 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 AL121895.2-201ENST00000619558 447 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 AC009268.2-201ENST00000621925 457 ntBASIC1.97□□□□□ -2.09
NPHP4O75161 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.97□□□□□ -2.09
NPHP4O75161 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.97□□□□□ -2.09
NPHP4O75161 RNU6-432P-201ENST00000384196 109 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 RNU6-1257P-201ENST00000384625 110 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 RNU6-754P-201ENST00000391166 107 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.96□□□□□ -2.1
NPHP4O75161 MIR1284-201ENST00000408337 120 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 AL953862.1-201ENST00000423016 168 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 OR10R1P-201ENST00000441524 1141 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHP4O75161 AC108729.1-201ENST00000487812 947 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NPHP4O75161 AC021146.8-201ENST00000507455 733 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 RNU6-390P-201ENST00000516259 103 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHP4O75161 AL138976.2-201ENST00000563989 694 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.96□□□□□ -2.1
NPHP4O75161 MTND3P19-201ENST00000603825 345 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 AC092574.1-201ENST00000609771 420 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 SDR42E1P2-201ENST00000614861 481 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 AL138955.1-201ENST00000622881 1040 ntBASIC1.96□□□□□ -2.1
NPHP4O75161 RNU6-560P-201ENST00000364007 108 ntBASIC1.95□□□□□ -2.1
NPHP4O75161 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.95□□□□□ -2.1
NPHP4O75161 AL109913.1-201ENST00000421173 514 ntBASIC1.95□□□□□ -2.1
NPHP4O75161 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP4O75161 MTCO2P25-201ENST00000447065 681 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms