Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SEPT14P3-201ENST00000439401 183 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AL732372.2-207ENST00000445840 183 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.91□□□□□ -1.94
CACNA1FO60840 AC104073.1-201ENST00000451988 151 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 SEPT14P2-201ENST00000453405 183 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.91□□□□□ -1.94
CACNA1FO60840 AC010587.1-201ENST00000505809 469 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC008716.1-201ENST00000511084 513 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 SEPT14P4-201ENST00000513445 186 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 FO082796.1-201ENST00000523795 183 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 RAB11AP2-201ENST00000545905 639 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 MIR98-201ENST00000606724 119 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 Y_RNA.804-201ENST00000615262 101 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CACNA1FO60840 RNU6-1078P-201ENST00000364522 103 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 SNORA48.3-201ENST00000391081 134 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 RNU2-9P-201ENST00000410194 145 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC007064.1-201ENST00000412238 351 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AL096701.2-201ENST00000416920 238 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.91□□□□□ -1.94
CACNA1FO60840 BNIP3P2-201ENST00000441221 577 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 FAM103A2P-201ENST00000444122 354 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC087879.1-201ENST00000474343 374 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 RNU6-1281P-201ENST00000516223 105 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 Y_RNA.702-201ENST00000516843 96 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 IGHV3-76-201ENST00000522465 295 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC022861.1-201ENST00000522981 663 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AF235103.2-201ENST00000525753 346 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AL138976.2-201ENST00000563989 694 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.91□□□□□ -1.94
CACNA1FO60840 AL356055.1-201ENST00000602528 446 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC136601.2-201ENST00000604356 474 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC139792.3-201ENST00000623525 224 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CACNA1FO60840 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CACNA1FO60840 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CACNA1FO60840 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CACNA1FO60840 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.9□□□□□ -1.95
CACNA1FO60840 Y_RNA.573-201ENST00000384763 105 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CACNA1FO60840 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 RNU6-1068P-201ENST00000410958 103 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 RNU6-373P-201ENST00000411247 98 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1FO60840 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.9□□□□□ -1.95
CACNA1FO60840 USP12PX-201ENST00000432383 1057 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.9□□□□□ -1.95
CACNA1FO60840 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 AL353691.1-201ENST00000451332 387 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 RPS20P24-201ENST00000457473 361 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC012181.1-201ENST00000479895 423 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 SNORA20.3-201ENST00000516880 132 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 AP000907.2-201ENST00000530827 353 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AL442663.2-201ENST00000554385 511 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1FO60840 SNORD53-201ENST00000579969 78 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 MIR3118-1-201ENST00000581787 76 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 BCRP9-201ENST00000605312 388 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC016727.1-205ENST00000605437 569 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC007038.2-201ENST00000608095 740 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC046143.2-201ENST00000609789 160 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AL132765.2-201ENST00000610812 351 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AC093648.1-201ENST00000623546 606 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1FO60840 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CACNA1FO60840 AC092125.1-201ENST00000562568 1995 ntBASIC2.9□□□□□ -1.95
CACNA1FO60840 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 RNU5E-1-201ENST00000362477 120 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AC104850.1-201ENST00000435940 476 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 CALM1P1-201ENST00000442082 433 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AMD1P1-201ENST00000457220 922 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNU6-261P-201ENST00000459506 102 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RPS27AP9-201ENST00000477681 438 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNA5SP402-201ENST00000517148 110 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 SUB1P2-201ENST00000556401 297 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 ANP32BP3-201ENST00000559213 706 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC107954.1-201ENST00000565906 727 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.89□□□□□ -1.95
CACNA1FO60840 AL136363.1-201ENST00000605349 337 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1FO60840 AC006020.1-201ENST00000420179 1854 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNU6-28P-201ENST00000362378 107 ntBASIC2.89□□□□□ -1.95
CACNA1FO60840 RNY1P12-201ENST00000364251 105 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms