Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RNU2-44P-201ENST00000516795 194 ntBASIC8.17□□□□□ -1.1
MSH5O43196 RNU4ATAC17P-201ENST00000517272 120 ntBASIC8.17□□□□□ -1.1
MSH5O43196 AC245014.3-201ENST00000618589 347 ntBASIC8.17□□□□□ -1.1
MSH5O43196 MIR6730-201ENST00000622213 67 ntBASIC8.17□□□□□ -1.1
MSH5O43196 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.17□□□□□ -1.1
MSH5O43196 AC012442.3-202ENST00000636742 206 ntBASIC8.17□□□□□ -1.1
MSH5O43196 AC000095.2-202ENST00000637415 154 ntBASIC8.17□□□□□ -1.1
MSH5O43196 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.17□□□□□ -1.1
MSH5O43196 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MSH5O43196 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
MSH5O43196 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
MSH5O43196 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MSH5O43196 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
MSH5O43196 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MSH5O43196 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
MSH5O43196 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.17□□□□□ -1.1
MSH5O43196 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC8.17□□□□□ -1.1
MSH5O43196 AC010329.2-201ENST00000595195 2737 ntBASIC8.16□□□□□ -1.1
MSH5O43196 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 RPL21P65-201ENST00000406094 466 ntBASIC8.16□□□□□ -1.1
MSH5O43196 MIR1185-2-201ENST00000408687 86 ntBASIC8.16□□□□□ -1.1
MSH5O43196 SNRPEP9-201ENST00000436794 238 ntBASIC8.16□□□□□ -1.1
MSH5O43196 AC079150.2-201ENST00000443733 78 ntBASIC8.16□□□□□ -1.1
MSH5O43196 RN7SL57P-201ENST00000493687 290 ntBASIC8.16□□□□□ -1.1
MSH5O43196 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC8.16□□□□□ -1.1
MSH5O43196 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 ATP5LP3-201ENST00000514223 304 ntBASIC8.16□□□□□ -1.1
MSH5O43196 RNU6-703P-201ENST00000516946 107 ntBASIC8.16□□□□□ -1.1
MSH5O43196 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 MIR3136-201ENST00000583498 78 ntBASIC8.16□□□□□ -1.1
MSH5O43196 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
MSH5O43196 AC100827.5-201ENST00000615883 426 ntBASIC8.16□□□□□ -1.1
MSH5O43196 AC095038.3-201ENST00000634439 195 ntBASIC8.16□□□□□ -1.1
MSH5O43196 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.16□□□□□ -1.1
MSH5O43196 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
MSH5O43196 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
MSH5O43196 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC8.15□□□□□ -1.1
MSH5O43196 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
MSH5O43196 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
MSH5O43196 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
MSH5O43196 MIR633-201ENST00000384821 98 ntBASIC8.15□□□□□ -1.1
MSH5O43196 CRYGGP-201ENST00000443337 145 ntBASIC8.15□□□□□ -1.1
MSH5O43196 RPL10P17-201ENST00000453852 316 ntBASIC8.15□□□□□ -1.1
MSH5O43196 RN7SL515P-201ENST00000463999 297 ntBASIC8.15□□□□□ -1.1
MSH5O43196 RPS23P4-201ENST00000487908 423 ntBASIC8.15□□□□□ -1.1
MSH5O43196 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.15□□□□□ -1.1
MSH5O43196 MIR1273E-201ENST00000581165 102 ntBASIC8.15□□□□□ -1.1
MSH5O43196 AC020916.2-201ENST00000591242 360 ntBASIC8.15□□□□□ -1.1
MSH5O43196 MIR376B-201ENST00000614515 100 ntBASIC8.15□□□□□ -1.1
MSH5O43196 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.15□□□□□ -1.1
MSH5O43196 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
MSH5O43196 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
MSH5O43196 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.15□□□□□ -1.11
MSH5O43196 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
MSH5O43196 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.14□□□□□ -1.11
MSH5O43196 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
MSH5O43196 RNU4-15P-201ENST00000362613 141 ntBASIC8.14□□□□□ -1.11
MSH5O43196 SNORA74A-201ENST00000364089 198 ntBASIC8.14□□□□□ -1.11
MSH5O43196 MIR1250-201ENST00000408098 113 ntBASIC8.14□□□□□ -1.11
MSH5O43196 AC125238.1-201ENST00000448842 249 ntBASIC8.14□□□□□ -1.11
MSH5O43196 RNA5SP20-201ENST00000515976 84 ntBASIC8.14□□□□□ -1.11
MSH5O43196 SNORA25.13-201ENST00000516395 103 ntBASIC8.14□□□□□ -1.11
MSH5O43196 AC027419.1-201ENST00000522976 328 ntBASIC8.14□□□□□ -1.11
MSH5O43196 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH5O43196 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH5O43196 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH5O43196 MIR3176-201ENST00000582210 90 ntBASIC8.14□□□□□ -1.11
MSH5O43196 PCGEM1.1-201ENST00000613431 131 ntBASIC8.14□□□□□ -1.11
MSH5O43196 MIR664A-201ENST00000626086 82 ntBASIC8.14□□□□□ -1.11
MSH5O43196 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
MSH5O43196 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
MSH5O43196 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.14□□□□□ -1.11
MSH5O43196 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH5O43196 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 AC022164.1-201ENST00000568767 2673 ntBASIC8.14□□□□□ -1.11
MSH5O43196 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
MSH5O43196 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH5O43196 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH5O43196 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
MSH5O43196 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH5O43196 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
MSH5O43196 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
MSH5O43196 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH5O43196 RNU1-134P-201ENST00000362935 165 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms